RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 TGFBRAP1Q8WUH2 860 aa26.64■■□□□ 1.86
SMARCD1-212ENST00000551966 LAMA3Q16787 3333 aa26.64■■□□□ 1.85
SMARCD1-212ENST00000551966 DDX60LQ5H9U9 1706 aaKnown RBP26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 ASNSP08243 561 aa26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 XRCC5P13010 732 aaKnown RBP26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 MAGEA10P43363 369 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 NAA16Q6N069 864 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 USP6NLQ92738 828 aa26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 NUDT12Q9BQG2 462 aa26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 TMOD4Q9NZQ9 345 aa26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 PALD1Q9ULE6 856 aa26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 PFASO15067 1338 aa26.63■■□□□ 1.85
SMARCD1-212ENST00000551966 COL6A3P12111 3177 aa26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 C19orf81C9J6K1 198 aa26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 USP17L10C9JJH3 530 aa26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 BAG3O95817 575 aa26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 GNAI2P04899 355 aa26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 PRKAR2AP13861 404 aaKnown RBP26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 NOL10Q9BSC4 688 aaKnown RBP26.62■■□□□ 1.85
SMARCD1-212ENST00000551966 GDF11O95390 407 aa26.61■■□□□ 1.85
SMARCD1-212ENST00000551966 CACNB2Q08289 660 aaPredicted RBP26.61■■□□□ 1.85
SMARCD1-212ENST00000551966 GPR153Q6NV75 609 aa26.61■■□□□ 1.85
SMARCD1-212ENST00000551966 EMILIN3Q9NT22 766 aa26.61■■□□□ 1.85
SMARCD1-212ENST00000551966 FLT1P17948 1338 aa26.61■■□□□ 1.85
SMARCD1-212ENST00000551966 CYP2E1P05181 493 aaPredicted RBP26.6■■□□□ 1.85
SMARCD1-212ENST00000551966 TRIM27P14373 513 aa26.6■■□□□ 1.85
SMARCD1-212ENST00000551966 LRIT3Q3SXY7 679 aa26.6■■□□□ 1.85
SMARCD1-212ENST00000551966 LHX8Q68G74 356 aa26.6■■□□□ 1.85
SMARCD1-212ENST00000551966 PORCNQ9H237 461 aa26.6■■□□□ 1.85
SMARCD1-212ENST00000551966 COL6A1P12109 1028 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 PLCG2P16885 1265 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 CCL14Q16627 93 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 MORN1Q5T089 497 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 Q7L0L9 218 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 DBNDD2Q9BQY9 259 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 ZBTB21Q9ULJ3 1066 aa26.59■■□□□ 1.85
SMARCD1-212ENST00000551966 CCND3P30281 292 aaPredicted RBP26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 MAPK4P31152 587 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 ERVK-9P63128 1117 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 ERVK-24P63145 666 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 DEFB123Q8N688 67 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 SOCS4Q8WXH5 440 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 GPR108Q9NPR9 543 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 GINM1Q9NU53 330 aa26.58■■□□□ 1.85
SMARCD1-212ENST00000551966 TNNI3KQ59H18 835 aa26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 TTC39AQ5SRH9 613 aa26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 GPR142Q7Z601 462 aa26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 TDHQ8IZJ6 230 aa26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 CRACR2BQ8N4Y2 399 aaPredicted RBP26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 SAP30BPQ9UHR5 308 aaKnown RBP26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 FPGT-TNNI3KV9GXZ4 949 aa26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 CDK5RAP2Q96SN8 1893 aa26.57■■□□□ 1.84
SMARCD1-212ENST00000551966 DYNLL1P63167 89 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-212ENST00000551966 POLA2Q14181 598 aa26.56■■□□□ 1.84
SMARCD1-212ENST00000551966 TRMT44Q8IYL2 757 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-212ENST00000551966 PIH1D3Q9NQM4 214 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-212ENST00000551966 BCAR3O75815 825 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 ZKSCAN1P17029 563 aaPredicted RBP26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 ZAP70P43403 619 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 CCDC158Q5M9N0 1113 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 ATF7IPQ6VMQ6 1270 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 PLEKHH3Q7Z736 793 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 CLUAP1Q96AJ1 413 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 PAGR1Q9BTK6 254 aa26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 UBE2OQ9C0C9 1292 aaKnown RBP26.55■■□□□ 1.84
SMARCD1-212ENST00000551966 MYO5AQ9Y4I1 1855 aaKnown RBP26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 IPO8O15397 1037 aaKnown RBP26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 RGS2P41220 211 aa26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 PDE3AQ14432 1141 aa26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 LRRC26Q2I0M4 334 aa26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 USP17L2Q6R6M4 530 aa26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 TRIM34Q9BYJ4 488 aa26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 MTMR10Q9NXD2 777 aa26.54■■□□□ 1.84
SMARCD1-212ENST00000551966 CNMDO75829 334 aa26.53■■□□□ 1.84
SMARCD1-212ENST00000551966 FRAT1Q92837 279 aaPredicted RBP26.53■■□□□ 1.84
SMARCD1-212ENST00000551966 ZNF512BQ96KM6 892 aaPredicted RBP26.53■■□□□ 1.84
SMARCD1-212ENST00000551966 FOCADQ5VW36 1801 aa26.53■■□□□ 1.84
SMARCD1-212ENST00000551966 GH2P01242 217 aa26.52■■□□□ 1.84
SMARCD1-212ENST00000551966 CCAR1Q8IX12 1150 aaKnown RBP26.52■■□□□ 1.84
SMARCD1-212ENST00000551966 GTF3C2Q8WUA4 911 aaPredicted RBP26.52■■□□□ 1.84
SMARCD1-212ENST00000551966 ATP8B2P98198 1209 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 TATDN1Q6P1N9 297 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 SSH3Q8TE77 659 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 C12orf42Q96LP6 360 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 APBA2Q99767 749 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 FLRT1Q9NZU1 646 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 STXBP5LQ9Y2K9 1186 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 NDUFB9Q9Y6M9 179 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 MAST2Q6P0Q8 1798 aa26.51■■□□□ 1.83
SMARCD1-212ENST00000551966 HLA-DOAP06340 250 aa26.5■■□□□ 1.83
SMARCD1-212ENST00000551966 CYP7A1P22680 504 aa26.5■■□□□ 1.83
SMARCD1-212ENST00000551966 MAP2K5Q13163 448 aa26.5■■□□□ 1.83
SMARCD1-212ENST00000551966 TMEM57Q8N5G2 664 aa26.5■■□□□ 1.83
SMARCD1-212ENST00000551966 EDC3Q96F86 508 aaKnown RBP26.5■■□□□ 1.83
SMARCD1-212ENST00000551966 RABGAP1Q9Y3P9 1069 aa26.5■■□□□ 1.83
SMARCD1-212ENST00000551966 IGSF3O75054 1194 aa26.49■■□□□ 1.83
SMARCD1-212ENST00000551966 ZYXQ15942 572 aaKnown RBP26.49■■□□□ 1.83
SMARCD1-212ENST00000551966 TLR7Q9NYK1 1049 aaKnown RBP26.49■■□□□ 1.83
SMARCD1-212ENST00000551966 DBNLQ9UJU6 430 aaKnown RBP26.49■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L15C9J2P7 530 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms