RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CTR9Q6PD62 1173 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 GINM1Q9NU53 330 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-225ENST00000551845 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 CXCL11O14625 94 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 IRF6O14896 467 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 PTPRAP18433 802 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 GJA5P36382 358 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 TDO2P48775 406 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
PTCH1-225ENST00000551845 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-225ENST00000551845 PPIL2Q13356 520 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 SNAPC2Q13487 334 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 CERKLQ49MI3 558 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-225ENST00000551845 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 TATDN1Q6P1N9 297 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 CABP5Q9NP86 173 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-225ENST00000551845 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
PTCH1-225ENST00000551845 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 MINDY4BA8MYZ0 360 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 ALDH1A1P00352 501 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 ASNSP08243 561 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 CETPP11597 493 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 FXR1P51114 621 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTCH1-225ENST00000551845 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
PTCH1-225ENST00000551845 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 NAPBQ9H115 298 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
PTCH1-225ENST00000551845 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-225ENST00000551845 CYP2D6P10635 497 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
PTCH1-225ENST00000551845 GABPAQ06546 454 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 RRP1BQ14684 758 aaKnown RBP12.68□□□□□ -0.38
PTCH1-225ENST00000551845 CCL15Q16663 113 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 AFG3L2Q9Y4W6 797 aa12.68□□□□□ -0.38
PTCH1-225ENST00000551845 CYP2D7A0A087X1C5 515 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 GDF11O95390 407 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 SLC3A2P08195 630 aaKnown RBP12.67□□□□□ -0.38
PTCH1-225ENST00000551845 CDK8P49336 464 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 SPP2Q13103 211 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 ABCB5Q2M3G0 1257 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 FASTKD5Q7L8L6 764 aaKnown RBP12.67□□□□□ -0.38
PTCH1-225ENST00000551845 CCDC17Q96LX7 622 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 MKNK2Q9HBH9 465 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 KCNH4Q9UQ05 1017 aa12.67□□□□□ -0.38
PTCH1-225ENST00000551845 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
PTCH1-225ENST00000551845 GH2P01242 217 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
PTCH1-225ENST00000551845 SHMT1P34896 483 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 ALX1Q15699 326 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-225ENST00000551845 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 PTPN18Q99952 460 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 CFHR5Q9BXR6 569 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 ECM29Q5VYK3 1845 aa12.66□□□□□ -0.38
PTCH1-225ENST00000551845 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 C19orf81C9J6K1 198 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 FGAP02671 866 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 EN2P19622 333 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-225ENST00000551845 CHMLP26374 656 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 EVX2Q03828 476 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 PDE4BQ07343 736 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 RAB3GAP1Q15042 981 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 VPS53Q5VIR6 699 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 EPB41L4AQ9HCS5 686 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-225ENST00000551845 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
PTCH1-225ENST00000551845 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-225ENST00000551845 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
PTCH1-225ENST00000551845 IGF2BP3O00425 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTCH1-225ENST00000551845 JAG1P78504 1218 aa12.64□□□□□ -0.39
PTCH1-225ENST00000551845 PPARAQ07869 468 aa12.64□□□□□ -0.39
PTCH1-225ENST00000551845 BMP2KLQ5H9B9 411 aa12.64□□□□□ -0.39
PTCH1-225ENST00000551845 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-225ENST00000551845 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-225ENST00000551845 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-225ENST00000551845 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
PTCH1-225ENST00000551845 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-225ENST00000551845 BTBD19C9JJ37 291 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms