RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 MMS19Q96T76 1030 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 VIPAS39Q9H9C1 493 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
ERBB3-219ENST00000551242 PBX1P40424 430 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 IRAK1P51617 712 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 USP14P54578 494 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 RABL6Q3YEC7 729 aaPredicted RBP13.86□□□□□ -0.19
ERBB3-219ENST00000551242 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 ATG9AQ7Z3C6 839 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 COG1Q8WTW3 980 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 NBPF3Q9H094 633 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 MYH8P13535 1937 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 AGPSO00116 658 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 EBAG9O00559 213 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 WWC3Q9ULE0 1092 aa13.86□□□□□ -0.19
ERBB3-219ENST00000551242 BTBD18B2RXH4 712 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 TUBBP07437 444 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 AFMP43652 599 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 GSCP56915 257 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-219ENST00000551242 FAM76AQ8TAV0 307 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 ZMYM6O95789 1325 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 FER1L4A9Z1Z3 1794 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
ERBB3-219ENST00000551242 MAP2K2P36507 400 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 TOB1P50616 345 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-219ENST00000551242 TRIM29Q14134 588 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 ZNF594Q96JF6 807 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-219ENST00000551242 CRACR2AQ9BSW2 395 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 PUS7LQ9H0K6 701 aaKnown RBP13.85□□□□□ -0.19
ERBB3-219ENST00000551242 SAMM50Q9Y512 469 aa13.85□□□□□ -0.19
ERBB3-219ENST00000551242 GOLGA6CA6NDK9 693 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 ZNF213O14771 459 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 SHOX2O60902 331 aaPredicted RBP13.84□□□□□ -0.19
ERBB3-219ENST00000551242 GOLGA6DP0CG33 693 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 CYB5R4Q7L1T6 521 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 CNGA4Q8IV77 575 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 GOLGA6AQ9NYA3 693 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 FBXO2Q9UK22 296 aaPredicted RBP13.84□□□□□ -0.19
ERBB3-219ENST00000551242 SYNRGQ9UMZ2 1314 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 ERCC5P28715 1186 aaPredicted RBP13.84□□□□□ -0.19
ERBB3-219ENST00000551242 SPATA1Q5VX52 437 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 CHP1Q99653 195 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 KCNJ14Q9UNX9 436 aa13.84□□□□□ -0.19
ERBB3-219ENST00000551242 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.19
ERBB3-219ENST00000551242 A1BGP04217 495 aa13.83□□□□□ -0.19
ERBB3-219ENST00000551242 ATP1A1P05023 1023 aaKnown RBP13.83□□□□□ -0.19
ERBB3-219ENST00000551242 IARSP41252 1262 aaKnown RBP13.83□□□□□ -0.19
ERBB3-219ENST00000551242 NUP88Q99567 741 aaPredicted RBP13.83□□□□□ -0.19
ERBB3-219ENST00000551242 SELENOOQ9BVL4 669 aa13.83□□□□□ -0.19
ERBB3-219ENST00000551242 FAM107BQ9H098 131 aa13.83□□□□□ -0.19
ERBB3-219ENST00000551242 ABHD10Q9NUJ1 306 aa13.83□□□□□ -0.19
ERBB3-219ENST00000551242 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.19
ERBB3-219ENST00000551242 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 MAP9Q49MG5 647 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 APOA5Q6Q788 366 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 TRAPPC11Q7Z392 1133 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 TMTC1Q8IUR5 882 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 NOSTRINQ8IVI9 506 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 SLC26A6Q9BXS9 759 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 PCDHB6Q9Y5E3 794 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 UBN2Q6ZU65 1347 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
ERBB3-219ENST00000551242 APPP05067 770 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 PTPREP23469 700 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 GUCY1A2P33402 732 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 VPS16Q9H269 839 aa13.83□□□□□ -0.2
ERBB3-219ENST00000551242 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
ERBB3-219ENST00000551242 CCDC172P0C7W6 258 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 INPP5BP32019 993 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CDKAL1Q5VV42 579 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 LMOD2Q6P5Q4 547 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 PI16Q6UXB8 463 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 TRIML1Q8N9V2 468 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 MARF1Q9Y4F3 1742 aaKnown RBP13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CPDO75976 1380 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 GOLGA6BA6NDN3 693 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 N4BP3O15049 544 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CDKL5O76039 1030 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 GNGT1P63211 74 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CUL4BQ13620 913 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 NTRK3Q16288 839 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CYP26C1Q6V0L0 522 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 STAMQ92783 540 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CAPS2Q9BXY5 557 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
ERBB3-219ENST00000551242 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
ERBB3-219ENST00000551242 MYO1AQ9UBC5 1043 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 323.8 ms