RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 TSPY3P0CV98 308 aa17.96■□□□□ 0.46
SCN8A-206ENST00000550891 TSPY8P0CW00 308 aa17.96■□□□□ 0.46
SCN8A-206ENST00000550891 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.46
SCN8A-206ENST00000550891 RNF26Q9BY78 433 aaPredicted RBP17.96■□□□□ 0.46
SCN8A-206ENST00000550891 CLIC4Q9Y696 253 aa17.96■□□□□ 0.46
SCN8A-206ENST00000550891 GPR75-ASB3A0A0A6YYF3 556 aa17.95■□□□□ 0.46
SCN8A-206ENST00000550891 F8W031 263 aaPredicted RBP17.95■□□□□ 0.46
SCN8A-206ENST00000550891 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
SCN8A-206ENST00000550891 FAM205AQ6ZU69 1335 aa17.95■□□□□ 0.46
SCN8A-206ENST00000550891 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
SCN8A-206ENST00000550891 KIF5BP33176 963 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
SCN8A-206ENST00000550891 DOK7Q18PE1 504 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 RTN4Q9NQC3 1192 aaKnown RBP17.94■□□□□ 0.46
SCN8A-206ENST00000550891 CTAGE5O15320 804 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 UVSSAQ2YD98 709 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 ADALQ6DHV7 355 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 NMT2O60551 498 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 EVX2Q03828 476 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 FAM160A1Q05DH4 1040 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 SLC15A2Q16348 729 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 DIS3L2Q8IYB7 885 aaKnown RBP17.94■□□□□ 0.46
SCN8A-206ENST00000550891 PPP1R9BQ96SB3 815 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
SCN8A-206ENST00000550891 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
SCN8A-206ENST00000550891 BRMS1Q9HCU9 246 aa17.93■□□□□ 0.46
SCN8A-206ENST00000550891 MMP1P03956 469 aa17.93■□□□□ 0.46
SCN8A-206ENST00000550891 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
SCN8A-206ENST00000550891 ZRSR1Q15695 479 aaKnown RBP17.93■□□□□ 0.46
SCN8A-206ENST00000550891 FAM163AQ96GL9 167 aaPredicted RBP17.93■□□□□ 0.46
SCN8A-206ENST00000550891 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
SCN8A-206ENST00000550891 KCNJ14Q9UNX9 436 aa17.93■□□□□ 0.46
SCN8A-206ENST00000550891 TTF2Q9UNY4 1162 aaKnown RBP17.93■□□□□ 0.46
SCN8A-206ENST00000550891 MYH2Q9UKX2 1941 aa17.93■□□□□ 0.46
SCN8A-206ENST00000550891 TROAPQ12815 778 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCN8A-206ENST00000550891 MKRN1Q9UHC7 482 aaKnown RBP17.92■□□□□ 0.46
SCN8A-206ENST00000550891 NOSTRINQ8IVI9 506 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 SDF4Q9BRK5 362 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 V9GY48 417 aaPredicted RBP17.92■□□□□ 0.46
SCN8A-206ENST00000550891 UBE2Q2LH0YL09 131 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 U2AF2P26368 475 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCN8A-206ENST00000550891 TYRO3Q06418 890 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 NBPF11Q86T75 865 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 STX8Q9UNK0 236 aa17.92■□□□□ 0.46
SCN8A-206ENST00000550891 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 BTBD18B2RXH4 712 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 DGKHQ86XP1 1220 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 CNKSR1Q969H4 720 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 PTMAP06454 111 aaKnown RBP17.91■□□□□ 0.46
SCN8A-206ENST00000550891 POTEAQ6S8J7 498 aa17.91■□□□□ 0.46
SCN8A-206ENST00000550891 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
SCN8A-206ENST00000550891 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
SCN8A-206ENST00000550891 STYK1Q6J9G0 422 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 FLT1P17948 1338 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 MARCKSP29966 332 aaPredicted RBP17.9■□□□□ 0.46
SCN8A-206ENST00000550891 PLCD1P51178 756 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 PICALMQ13492 652 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 TMTC3Q6ZXV5 915 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 DAGLAQ9Y4D2 1042 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 GAKO14976 1311 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 PNMA1Q8ND90 353 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 ANO8Q9HCE9 1232 aaPredicted RBP17.9■□□□□ 0.46
SCN8A-206ENST00000550891 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
SCN8A-206ENST00000550891 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 RILPL1Q5EBL4 403 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 SLC44A5Q8NCS7 719 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 FUCA2Q9BTY2 467 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 GOLPH3LQ9H4A5 285 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 DBNDD1Q9H9R9 158 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 VPS54Q9P1Q0 977 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 ROBO3Q96MS0 1386 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 hCG_1642624A0A1W2PR95 340 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 GNAQP50148 359 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 FAM200AQ8TCP9 573 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 TEKT1Q969V4 418 aa17.89■□□□□ 0.45
SCN8A-206ENST00000550891 ATP2B1P20020 1258 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 BAG6P46379 1132 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 PIBF1Q8WXW3 757 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.88■□□□□ 0.45
SCN8A-206ENST00000550891 KRT2P35908 639 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 RHBDL3P58872 404 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 USP25Q9UHP3 1055 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 CEP131Q9UPN4 1083 aa17.88■□□□□ 0.45
SCN8A-206ENST00000550891 MYH15Q9Y2K3 1946 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 CHRNA5P30532 468 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 CDK8P49336 464 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms