RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 IRX3P78415 501 aaPredicted RBP18.52■□□□□ 0.56
SVOP-203ENST00000550436 MAP3K21Q5TCX8 1036 aa18.52■□□□□ 0.56
SVOP-203ENST00000550436 DEFB123Q8N688 67 aa18.52■□□□□ 0.56
SVOP-203ENST00000550436 TGFBRAP1Q8WUH2 860 aa18.52■□□□□ 0.56
SVOP-203ENST00000550436 PORCNQ9H237 461 aa18.52■□□□□ 0.56
SVOP-203ENST00000550436 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
SVOP-203ENST00000550436 CCND3P30281 292 aaPredicted RBP18.51■□□□□ 0.55
SVOP-203ENST00000550436 HERVK_113P62684 666 aa18.51■□□□□ 0.55
SVOP-203ENST00000550436 CACNB2Q08289 660 aaPredicted RBP18.51■□□□□ 0.55
SVOP-203ENST00000550436 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
SVOP-203ENST00000550436 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
SVOP-203ENST00000550436 PI4KBQ9UBF8 816 aa18.51■□□□□ 0.55
SVOP-203ENST00000550436 SAP30BPQ9UHR5 308 aaKnown RBP18.51■□□□□ 0.55
SVOP-203ENST00000550436 HERC5Q9UII4 1024 aaKnown RBP18.51■□□□□ 0.55
SVOP-203ENST00000550436 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
SVOP-203ENST00000550436 MAP4K4O95819 1239 aaPredicted RBP18.5■□□□□ 0.55
SVOP-203ENST00000550436 GNAI3P08754 354 aa18.5■□□□□ 0.55
SVOP-203ENST00000550436 HOXA7P31268 230 aaPredicted RBP18.5■□□□□ 0.55
SVOP-203ENST00000550436 GPRC5AQ8NFJ5 357 aa18.5■□□□□ 0.55
SVOP-203ENST00000550436 NUDT12Q9BQG2 462 aa18.5■□□□□ 0.55
SVOP-203ENST00000550436 PAGR1Q9BTK6 254 aa18.5■□□□□ 0.55
SVOP-203ENST00000550436 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
SVOP-203ENST00000550436 TMOD4Q9NZQ9 345 aa18.5■□□□□ 0.55
SVOP-203ENST00000550436 FOCADQ5VW36 1801 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
SVOP-203ENST00000550436 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
SVOP-203ENST00000550436 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 USP6NLQ92738 828 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 DBNDD2Q9BQY9 259 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 EMILIN3Q9NT22 766 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 FLT1P17948 1338 aa18.49■□□□□ 0.55
SVOP-203ENST00000550436 ASNSP08243 561 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 COL6A1P12109 1028 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 TRIM27P14373 513 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 G3BP1Q13283 466 aaKnown RBP eCLIP18.48■□□□□ 0.55
SVOP-203ENST00000550436 LRRC26Q2I0M4 334 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 LHX8Q68G74 356 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 TDHQ8IZJ6 230 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 UBE2OQ9C0C9 1292 aaKnown RBP18.48■□□□□ 0.55
SVOP-203ENST00000550436 MTMR10Q9NXD2 777 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 ZBTB21Q9ULJ3 1066 aa18.48■□□□□ 0.55
SVOP-203ENST00000550436 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 IPO8O15397 1037 aaKnown RBP18.47■□□□□ 0.55
SVOP-203ENST00000550436 CYP2E1P05181 493 aaPredicted RBP18.47■□□□□ 0.55
SVOP-203ENST00000550436 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 ZKSCAN1P17029 563 aaPredicted RBP18.47■□□□□ 0.55
SVOP-203ENST00000550436 PPP4CP60510 307 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 ERVK-9P63128 1117 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 ERVK-24P63145 666 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 LRIT3Q3SXY7 679 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 MORN1Q5T089 497 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 GPR142Q7Z601 462 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
SVOP-203ENST00000550436 PIH1D3Q9NQM4 214 aaKnown RBP18.47■□□□□ 0.55
SVOP-203ENST00000550436 MAST2Q6P0Q8 1798 aa18.47■□□□□ 0.55
SVOP-203ENST00000550436 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
SVOP-203ENST00000550436 CNMDO75829 334 aa18.46■□□□□ 0.55
SVOP-203ENST00000550436 XRCC5P13010 732 aaKnown RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 MDM2Q00987 491 aaPredicted RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 CRACR2BQ8N4Y2 399 aaPredicted RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
SVOP-203ENST00000550436 NOL10Q9BSC4 688 aaKnown RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 DHX36Q9H2U1 1008 aaKnown RBP18.46■□□□□ 0.55
SVOP-203ENST00000550436 FLRT1Q9NZU1 646 aa18.46■□□□□ 0.55
SVOP-203ENST00000550436 MYH1P12882 1939 aa18.46■□□□□ 0.55
SVOP-203ENST00000550436 C19orf81C9J6K1 198 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 BAG3O95817 575 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 GNAI2P04899 355 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 ZAP70P43403 619 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 TTC39AQ5SRH9 613 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 PLEKHH3Q7Z736 793 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 SOCS4Q8WXH5 440 aa18.45■□□□□ 0.54
SVOP-203ENST00000550436 GH2P01242 217 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 MAPK4P31152 587 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 TNNI3KQ59H18 835 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 ZKSCAN2Q63HK3 967 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 GPR153Q6NV75 609 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 FPGT-TNNI3KV9GXZ4 949 aa18.44■□□□□ 0.54
SVOP-203ENST00000550436 RGS2P41220 211 aa18.43■□□□□ 0.54
SVOP-203ENST00000550436 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
SVOP-203ENST00000550436 TRIM34Q9BYJ4 488 aa18.43■□□□□ 0.54
SVOP-203ENST00000550436 TLR7Q9NYK1 1049 aaKnown RBP18.43■□□□□ 0.54
SVOP-203ENST00000550436 STXBP5LQ9Y2K9 1186 aa18.43■□□□□ 0.54
SVOP-203ENST00000550436 PLCG2P16885 1265 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 CYP7A1P22680 504 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 MAP2K5Q13163 448 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 USP17L2Q6R6M4 530 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 ACER1Q8TDN7 264 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 C1orf115Q9H7X2 142 aa18.42■□□□□ 0.54
SVOP-203ENST00000550436 POLA2Q14181 598 aa18.41■□□□□ 0.54
SVOP-203ENST00000550436 TMEM57Q8N5G2 664 aa18.41■□□□□ 0.54
SVOP-203ENST00000550436 APBA2Q99767 749 aa18.41■□□□□ 0.54
SVOP-203ENST00000550436 BTBD7Q9P203 1132 aa18.41■□□□□ 0.54
SVOP-203ENST00000550436 ATN1P54259 1190 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms