RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 Q3C1V9 767 aa14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 GDF15Q99988 308 aa14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 C1orf115Q9H7X2 142 aa14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 RBPJLQ9UBG7 517 aa14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 DBNLQ9UJU6 430 aaKnown RBP14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 MYO5AQ9Y4I1 1855 aaKnown RBP14.23□□□□□ -0.13
SMARCD1-208ENST00000550280 RPTORQ8N122 1335 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 HERVK_113P62684 666 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 USP6NLQ92738 828 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 PORCNQ9H237 461 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 DHX36Q9H2U1 1008 aaKnown RBP14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 EMILIN3Q9NT22 766 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 SAP30BPQ9UHR5 308 aaKnown RBP14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 ZBTB21Q9ULJ3 1066 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 NDUFB9Q9Y6M9 179 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
SMARCD1-208ENST00000550280 PFASO15067 1338 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 ASNSP08243 561 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 RLBP1P12271 317 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 CYP2B6P20813 491 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 TTC39AQ5SRH9 613 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 NECAB2Q7Z6G3 386 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 EAF2Q96CJ1 260 aaPredicted RBP14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 ZMYND8Q9ULU4 1186 aaPredicted RBP14.21□□□□□ -0.13
SMARCD1-208ENST00000550280 DDX60LQ5H9U9 1706 aaKnown RBP14.21□□□□□ -0.14
SMARCD1-208ENST00000550280 A0A1W2PPC1 479 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 CNMDO75829 334 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 CAPN2P17655 700 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 CCL14Q16627 93 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 FOXP4Q8IVH2 680 aaPredicted RBP14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 C7orf61Q8IZ16 206 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 ANKLE1Q8NAG6 615 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 ANTXR1Q9H6X2 564 aa14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 HMX1Q9NP08 348 aaPredicted RBP14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 NOP58Q9Y2X3 529 aaKnown RBP14.2□□□□□ -0.14
SMARCD1-208ENST00000550280 USP17L10C9JJH3 530 aa14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 BAG3O95817 575 aa14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 IRX3P78415 501 aaPredicted RBP14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 EVX2Q03828 476 aa14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 CACNB2Q08289 660 aaPredicted RBP14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 MORN1Q5T089 497 aa14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 MIGA1Q8NAN2 632 aa14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 CCDC8Q9H0W5 538 aaPredicted RBP14.19□□□□□ -0.14
SMARCD1-208ENST00000550280 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 GH2P01242 217 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 COL6A1P12109 1028 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 PLCG2P16885 1265 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 SYN1P17600 705 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 CYP7A1P22680 504 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 CCND3P30281 292 aaPredicted RBP14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 ERVK-9P63128 1117 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 ERVK-24P63145 666 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 ZKSCAN2Q63HK3 967 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 LHX8Q68G74 356 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 TATDN1Q6P1N9 297 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 GPR142Q7Z601 462 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 GPRC5AQ8NFJ5 357 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 TMOD4Q9NZQ9 345 aa14.18□□□□□ -0.14
SMARCD1-208ENST00000550280 GUCY1A2P33402 732 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 BMP8BP34820 402 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 CRACR2BQ8N4Y2 399 aaPredicted RBP14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 ACER1Q8TDN7 264 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 C12orf42Q96LP6 360 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 PAGR1Q9BTK6 254 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 C11orf49Q9H6J7 331 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 FLRT1Q9NZU1 646 aa14.17□□□□□ -0.14
SMARCD1-208ENST00000550280 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
SMARCD1-208ENST00000550280 OS9Q13438 667 aaPredicted RBP14.16□□□□□ -0.14
SMARCD1-208ENST00000550280 ZYXQ15942 572 aaKnown RBP14.16□□□□□ -0.14
SMARCD1-208ENST00000550280 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
SMARCD1-208ENST00000550280 RIOK1Q9BRS2 568 aaKnown RBP14.16□□□□□ -0.14
SMARCD1-208ENST00000550280 IDH1O75874 414 aaKnown RBP14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 IGHA2P01877 340 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 MAPK4P31152 587 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 SHMT1P34896 483 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 PLCD1P51178 756 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 PLEKHH3Q7Z736 793 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 MAGEB6Q8N7X4 407 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
SMARCD1-208ENST00000550280 IGSF3O75054 1194 aa14.14□□□□□ -0.15
SMARCD1-208ENST00000550280 HLA-DOAP06340 250 aa14.14□□□□□ -0.15
SMARCD1-208ENST00000550280 ZKSCAN1P17029 563 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms