RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
PXN-216ENST00000550205 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
PXN-216ENST00000550205 PALD1Q9ULE6 856 aa11.9□□□□□ -0.5
PXN-216ENST00000550205 COL6A3P12111 3177 aa11.9□□□□□ -0.5
PXN-216ENST00000550205 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
PXN-216ENST00000550205 XRCC5P13010 732 aaKnown RBP11.89□□□□□ -0.51
PXN-216ENST00000550205 ZAP70P43403 619 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 MAP3K21Q5TCX8 1036 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 CERS3Q8IU89 383 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
PXN-216ENST00000550205 PAWRQ96IZ0 340 aaKnown RBP11.89□□□□□ -0.51
PXN-216ENST00000550205 P2RX7Q99572 595 aaKnown RBP11.89□□□□□ -0.51
PXN-216ENST00000550205 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
PXN-216ENST00000550205 TAOK2Q9UL54 1235 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 ZBTB21Q9ULJ3 1066 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
PXN-216ENST00000550205 MNX1P50219 401 aaPredicted RBP11.88□□□□□ -0.51
PXN-216ENST00000550205 HERVK_113P62684 666 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
PXN-216ENST00000550205 OS9Q13438 667 aaPredicted RBP11.88□□□□□ -0.51
PXN-216ENST00000550205 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
PXN-216ENST00000550205 TATDN1Q6P1N9 297 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 NECAB2Q7Z6G3 386 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 SOCS4Q8WXH5 440 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 TRIB2Q92519 343 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
PXN-216ENST00000550205 TLR7Q9NYK1 1049 aaKnown RBP11.88□□□□□ -0.51
PXN-216ENST00000550205 RBPJLQ9UBG7 517 aa11.88□□□□□ -0.51
PXN-216ENST00000550205 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 CYP7A1P22680 504 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 TRIM32Q13049 653 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 TRMT44Q8IYL2 757 aaKnown RBP11.87□□□□□ -0.51
PXN-216ENST00000550205 DIS3LQ8TF46 1054 aaKnown RBP11.87□□□□□ -0.51
PXN-216ENST00000550205 GTF3C2Q8WUA4 911 aaPredicted RBP11.87□□□□□ -0.51
PXN-216ENST00000550205 USP6NLQ92738 828 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 EAF2Q96CJ1 260 aaPredicted RBP11.87□□□□□ -0.51
PXN-216ENST00000550205 TRIM34Q9BYJ4 488 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 EHD4Q9H223 541 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 A0A0C4DFX4 3053 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 DNAH12Q6ZR08 3092 aa11.87□□□□□ -0.51
PXN-216ENST00000550205 GDF11O95390 407 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 RLBP1P12271 317 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 MAPK4P31152 587 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 ERVK-9P63128 1117 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 ERVK-24P63145 666 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 DYNLL1P63167 89 aaKnown RBP11.86□□□□□ -0.51
PXN-216ENST00000550205 USP17L2Q6R6M4 530 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
PXN-216ENST00000550205 C12orf42Q96LP6 360 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 NUDT12Q9BQG2 462 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 NBPF3Q9H094 633 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
PXN-216ENST00000550205 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
PXN-216ENST00000550205 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
PXN-216ENST00000550205 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
PXN-216ENST00000550205 PEX10O60683 326 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
PXN-216ENST00000550205 GH2P01242 217 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
PXN-216ENST00000550205 BMP8BP34820 402 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 Q3C1V9 767 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 MORN1Q5T089 497 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 MIGA1Q8NAN2 632 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 GDF15Q99988 308 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 ALPK3Q96L96 1907 aa11.85□□□□□ -0.51
PXN-216ENST00000550205 DDX60LQ5H9U9 1706 aaKnown RBP11.84□□□□□ -0.51
PXN-216ENST00000550205 LAMA2P24043 3122 aaKnown RBP11.84□□□□□ -0.51
PXN-216ENST00000550205 CYP2B6P20813 491 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 RGS2P41220 211 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 USP5P45974 858 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 MAP3K12Q12852 859 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 PDE3AQ14432 1141 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 LBX2Q6XYB7 198 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 ERC1Q8IUD2 1116 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 MAGEB6Q8N7X4 407 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 KIAA1683Q9H0B3 1180 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 PORCNQ9H237 461 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 C11orf49Q9H6J7 331 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 RABGAP1Q9Y3P9 1069 aa11.84□□□□□ -0.51
PXN-216ENST00000550205 USP17L15C9J2P7 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L13C9JLJ4 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L11C9JVI0 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L18D6R9N7 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L22D6RA61 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L17D6RBQ6 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L19D6RCP7 530 aa11.83□□□□□ -0.52
PXN-216ENST00000550205 USP17L20D6RJB6 530 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms