RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ATAD5Q96QE3 1844 aa17.84■□□□□ 0.45
GPN3-206ENST00000549963 THSD7BQ9C0I4 1608 aa17.83■□□□□ 0.45
GPN3-206ENST00000549963 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
GPN3-206ENST00000549963 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
GPN3-206ENST00000549963 GJA5P36382 358 aa17.83■□□□□ 0.44
GPN3-206ENST00000549963 GABPAQ06546 454 aa17.83■□□□□ 0.44
GPN3-206ENST00000549963 ALX1Q15699 326 aa17.83■□□□□ 0.44
GPN3-206ENST00000549963 CCDC17Q96LX7 622 aa17.83■□□□□ 0.44
GPN3-206ENST00000549963 DNAJC18Q9H819 358 aa17.83■□□□□ 0.44
GPN3-206ENST00000549963 DDX60LQ5H9U9 1706 aaKnown RBP17.82■□□□□ 0.44
GPN3-206ENST00000549963 CYP2D7A0A087X1C5 515 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 MPHOSPH10O00566 681 aaKnown RBP17.82■□□□□ 0.44
GPN3-206ENST00000549963 GDF11O95390 407 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 CDK8P49336 464 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 PDE4BQ07343 736 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 CCL15Q16663 113 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 C16orf86Q6ZW13 317 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 FASTKD5Q7L8L6 764 aaKnown RBP17.82■□□□□ 0.44
GPN3-206ENST00000549963 DYNLL2Q96FJ2 89 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 AFG3L2Q9Y4W6 797 aa17.82■□□□□ 0.44
GPN3-206ENST00000549963 TESPA1A2RU30 521 aaPredicted RBP17.81■□□□□ 0.44
GPN3-206ENST00000549963 TRPA1O75762 1119 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 GH2P01242 217 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 HSPD1P10809 573 aaKnown RBP17.81■□□□□ 0.44
GPN3-206ENST00000549963 CHMLP26374 656 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 SHMT1P34896 483 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 CTCFP49711 727 aaPredicted RBP17.81■□□□□ 0.44
GPN3-206ENST00000549963 CASC1Q6TDU7 716 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 IFNL1Q8IU54 200 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 ZNF444Q8N0Y2 327 aaPredicted RBP17.81■□□□□ 0.44
GPN3-206ENST00000549963 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 EPB41L4AQ9HCS5 686 aaPredicted RBP17.81■□□□□ 0.44
GPN3-206ENST00000549963 RNF186Q9NXI6 227 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 ZBTB21Q9ULJ3 1066 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 KCNH4Q9UQ05 1017 aa17.81■□□□□ 0.44
GPN3-206ENST00000549963 RAD50Q92878 1312 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 TRIM75PA6NK02 468 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 PPARAQ07869 468 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 SPP2Q13103 211 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
GPN3-206ENST00000549963 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 ZNF589Q86UQ0 364 aaPredicted RBP17.8■□□□□ 0.44
GPN3-206ENST00000549963 WDR18Q9BV38 432 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
GPN3-206ENST00000549963 C19orf81C9J6K1 198 aa17.79■□□□□ 0.44
GPN3-206ENST00000549963 FGAP02671 866 aa17.79■□□□□ 0.44
GPN3-206ENST00000549963 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
GPN3-206ENST00000549963 TMEM179Q6ZVK1 233 aa17.79■□□□□ 0.44
GPN3-206ENST00000549963 STK11IPQ8N1F8 1099 aa17.79■□□□□ 0.44
GPN3-206ENST00000549963 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
GPN3-206ENST00000549963 LAMB1P07942 1786 aa17.79■□□□□ 0.44
GPN3-206ENST00000549963 USP17L10C9JJH3 530 aa17.78■□□□□ 0.44
GPN3-206ENST00000549963 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
GPN3-206ENST00000549963 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
GPN3-206ENST00000549963 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
GPN3-206ENST00000549963 DSCC1Q9BVC3 393 aa17.78■□□□□ 0.44
GPN3-206ENST00000549963 TMOD4Q9NZQ9 345 aa17.78■□□□□ 0.44
GPN3-206ENST00000549963 ZMYM6O95789 1325 aa17.77■□□□□ 0.44
GPN3-206ENST00000549963 A0A0G2JLL6 359 aaPredicted RBP17.77■□□□□ 0.44
GPN3-206ENST00000549963 ZNF213O14771 459 aa17.77■□□□□ 0.44
GPN3-206ENST00000549963 FOXN1O15353 648 aa17.77■□□□□ 0.44
GPN3-206ENST00000549963 EVX2Q03828 476 aa17.77■□□□□ 0.44
GPN3-206ENST00000549963 PRRT2Q7Z6L0 340 aaPredicted RBP17.77■□□□□ 0.44
GPN3-206ENST00000549963 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
GPN3-206ENST00000549963 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
GPN3-206ENST00000549963 ROBO3Q96MS0 1386 aa17.77■□□□□ 0.43
GPN3-206ENST00000549963 PHIPQ8WWQ0 1821 aa17.77■□□□□ 0.43
GPN3-206ENST00000549963 USP14P54578 494 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 BACE1P56817 501 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 PABPC4Q13310 644 aaKnown RBP eCLIP17.76■□□□□ 0.43
GPN3-206ENST00000549963 ANKRD23Q86SG2 305 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 CCDC84Q86UT8 332 aaPredicted RBP17.76■□□□□ 0.43
GPN3-206ENST00000549963 PROCA1Q8NCQ7 364 aaPredicted RBP17.76■□□□□ 0.43
GPN3-206ENST00000549963 FEZ1Q99689 392 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 PTPN18Q99952 460 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 SH2D4AQ9H788 454 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 ZFYVE28Q9HCC9 887 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 ARHGEF10LQ9HCE6 1279 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.76■□□□□ 0.43
GPN3-206ENST00000549963 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
GPN3-206ENST00000549963 BTBD19C9JJ37 291 aa17.75■□□□□ 0.43
GPN3-206ENST00000549963 IGF2BP3O00425 579 aaKnown RBP eCLIP17.75■□□□□ 0.43
GPN3-206ENST00000549963 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
GPN3-206ENST00000549963 JAG1P78504 1218 aa17.75■□□□□ 0.43
GPN3-206ENST00000549963 SEPT2Q15019 361 aa17.75■□□□□ 0.43
GPN3-206ENST00000549963 TAF1CQ15572 869 aaPredicted RBP17.75■□□□□ 0.43
GPN3-206ENST00000549963 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
GPN3-206ENST00000549963 USP17L2Q6R6M4 530 aa17.75■□□□□ 0.43
GPN3-206ENST00000549963 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
GPN3-206ENST00000549963 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
GPN3-206ENST00000549963 PCNTO95613 3336 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 PDHXO00330 501 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 FOXP2O15409 715 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 SGSM2O43147 1006 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 CDC45O75419 566 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms