RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 DLC1Q96QB1 1528 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 PTPRMP28827 1452 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 MLH3Q9UHC1 1453 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 A0A0A0MRY4 1105 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 LOC102724428A0A0B4J2F2 783 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 SMTNL1A8MU46 457 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 KIF3BO15066 747 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 MMP20O60882 483 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 SMNDC1O75940 238 aaKnown RBP eCLIP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 ADCY5O95622 1261 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 PROCP04070 461 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 NPR3P17342 541 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 MX1P20591 662 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 GRNP28799 593 aaKnown RBP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 AFF1P51825 1210 aaKnown RBP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 SIK1P57059 783 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 SLC20A2Q08357 652 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 PKP1Q13835 747 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 XKR5Q6UX68 686 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 ZNF438Q7Z4V0 828 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 ZGPATQ8N5A5 531 aaKnown RBP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 RNF214Q8ND24 703 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 NUDT8Q8WV74 236 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 LPIN3Q9BQK8 851 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 SRCIN1Q9C0H9 1055 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 TSPYL1Q9H0U9 437 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 NAGPAQ9UK23 515 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 ZHX1Q9UKY1 873 aaPredicted RBP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 ITSN1Q15811 1721 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 RPAP1Q9BWH6 1393 aaPredicted RBP4.51□□□□□ -1.69
RAB5B-207ENST00000549915 TUBGCP6Q96RT7 1819 aa4.51□□□□□ -1.69
RAB5B-207ENST00000549915 N4BP2Q86UW6 1770 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 CCDC171Q6TFL3 1326 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 YTHDC2Q9H6S0 1430 aaKnown RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 ADGRL3Q9HAR2 1447 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 C1QTNF9BB2RNN3 333 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 CAVIN2O95810 425 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 PRKAR2BP31323 418 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 SCNN1AP37088 669 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 BAG6P46379 1132 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 NEK4P51957 841 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 COL9A3Q14050 684 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 TWISTNBQ3B726 338 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 PERM1Q5SV97 790 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 CEP85Q6P2H3 762 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 CD163Q86VB7 1156 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 AEBP1Q8IUX7 1158 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 FMR1NBQ8N0W7 255 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 GPR152Q8TDT2 470 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 GTF3C2Q8WUA4 911 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 PLD4Q96BZ4 506 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 LENG1Q96BZ8 264 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 SMG9Q9H0W8 520 aaKnown RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 C1orf115Q9H7X2 142 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 PRDM10Q9NQV6 1147 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.5□□□□□ -1.69
RAB5B-207ENST00000549915 PAXBP1Q9Y5B6 917 aa4.5□□□□□ -1.69
RAB5B-207ENST00000549915 PXDNLA1KZ92 1463 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 SALL3Q9BXA9 1300 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 EDC4Q6P2E9 1401 aaKnown RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 KIF2AO00139 706 aaPredicted RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 FYB1O15117 783 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 NEMFO60524 1076 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 KIF4AO95239 1232 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 CCDC192P0DO97 292 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 EIF1AXP47813 144 aaKnown RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 CBX1P83916 185 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 FKBP4Q02790 459 aaKnown RBP eCLIP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 DHX8Q14562 1220 aaKnown RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 TRIP4Q15650 581 aaPredicted RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 FAM117BQ6P1L5 589 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 FBXO11Q86XK2 927 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 AFAP1Q8N556 730 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 NUDT16Q96DE0 195 aaKnown RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 FUCA2Q9BTY2 467 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 ELP3Q9H9T3 547 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 STAP2Q9UGK3 403 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 SEPT3Q9UH03 358 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 DDX41Q9UJV9 622 aaKnown RBP4.49□□□□□ -1.69
RAB5B-207ENST00000549915 MSH6P52701 1360 aa4.49□□□□□ -1.69
RAB5B-207ENST00000549915 ELP1O95163 1332 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 SOS1Q07889 1333 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 POGZQ7Z3K3 1410 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 A0A0U1RQG5 324 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 ZSCAN22P10073 491 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 HCLS1P14317 486 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 CDC25BP30305 580 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 CHRNA4P43681 627 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 CCT4P50991 539 aaKnown RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 PDE1AP54750 535 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 CABP4P57796 275 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 NCBP1Q09161 790 aaKnown RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 ATP2B3Q16720 1220 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 IGF2-ASQ6U949 168 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 ZNF771Q7L3S4 317 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 USP48Q86UV5 1035 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 TXNRD3Q86VQ6 643 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 NCAPG2Q86XI2 1143 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 KRT222Q8N1A0 295 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms