RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CENPFP49454 3210 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 FLT1P17948 1338 aa12.65□□□□□ -0.38
CCDC38-207ENST00000549752 HTTP42858 3142 aa12.65□□□□□ -0.38
CCDC38-207ENST00000549752 USP17L5A8MUK1 530 aa12.65□□□□□ -0.38
CCDC38-207ENST00000549752 ASNSP08243 561 aa12.65□□□□□ -0.38
CCDC38-207ENST00000549752 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
CCDC38-207ENST00000549752 GADL1Q6ZQY3 521 aa12.65□□□□□ -0.38
CCDC38-207ENST00000549752 MAPKAPK5Q8IW41 473 aa12.65□□□□□ -0.38
CCDC38-207ENST00000549752 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC38-207ENST00000549752 SOX10P56693 466 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 C17orf99Q6UX52 265 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 ADGRA1Q86SQ6 560 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 METTL16Q86W50 562 aaKnown RBP12.64□□□□□ -0.39
CCDC38-207ENST00000549752 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
CCDC38-207ENST00000549752 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
CCDC38-207ENST00000549752 DDX60LQ5H9U9 1706 aaKnown RBP12.64□□□□□ -0.39
CCDC38-207ENST00000549752 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 GOLIM4O00461 696 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 ATP5JP18859 108 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 MOGSQ13724 837 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 SLC9C1Q4G0N8 1177 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 ZSCAN25Q6NSZ9 544 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
CCDC38-207ENST00000549752 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
CCDC38-207ENST00000549752 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
CCDC38-207ENST00000549752 ANTXR1Q9H6X2 564 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 PALD1Q9ULE6 856 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 AGTPBP1Q9UPW5 1226 aa12.63□□□□□ -0.39
CCDC38-207ENST00000549752 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 PDE6AP16499 860 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 OSBPP22059 807 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
CCDC38-207ENST00000549752 SPP2Q13103 211 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 MFRPQ9BY79 579 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 EHD4Q9H223 541 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 PAG1Q9NWQ8 432 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
CCDC38-207ENST00000549752 C19orf81C9J6K1 198 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
CCDC38-207ENST00000549752 PSMC4P43686 418 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 FCGRTP55899 365 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 HAUS7Q99871 368 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 DCTPP1Q9H773 170 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
CCDC38-207ENST00000549752 SAP30BPQ9UHR5 308 aaKnown RBP12.61□□□□□ -0.39
CCDC38-207ENST00000549752 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 BCRP11274 1271 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 GCLCP48506 637 aaPredicted RBP12.6□□□□□ -0.39
CCDC38-207ENST00000549752 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 KCNV2Q8TDN2 545 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
CCDC38-207ENST00000549752 POLR3DP05423 398 aaPredicted RBP12.59□□□□□ -0.39
CCDC38-207ENST00000549752 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 CYP2C8P10632 490 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC38-207ENST00000549752 HMGCS2P54868 508 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
CCDC38-207ENST00000549752 BACE1P56817 501 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
CCDC38-207ENST00000549752 RAET1EQ8TD07 263 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
CCDC38-207ENST00000549752 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 ZBTB21Q9ULJ3 1066 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
CCDC38-207ENST00000549752 ADD2P35612 726 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-207ENST00000549752 AAMPQ13685 434 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 FAM110CQ1W6H9 321 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 CERKLQ49MI3 558 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-207ENST00000549752 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 GTF3C2Q8WUA4 911 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-207ENST00000549752 ZNF333Q96JL9 665 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 TRIM47Q96LD4 638 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 ATP8A2Q9NTI2 1148 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-207ENST00000549752 MYPNQ86TC9 1320 aa12.58□□□□□ -0.4
CCDC38-207ENST00000549752 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 GDF11O95390 407 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 USP14P54578 494 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms