RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 RNF214Q8ND24 703 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 EYA3Q99504 573 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 DDX19AQ9NUU7 478 aaKnown RBP22.2■■□□□ 1.14
BRF1-215ENST00000549655 POLR3EQ9NVU0 708 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 SUGT1Q9Y2Z0 365 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 DDAH1O94760 285 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 ME1P48163 572 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 NT5C2P49902 561 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 PLCD1P51178 756 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 TFAP4Q01664 338 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 GNL2Q13823 731 aaKnown RBP22.19■■□□□ 1.14
BRF1-215ENST00000549655 MKNK2Q9HBH9 465 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 G3V3G9 751 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 DCAF8Q5TAQ9 597 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 CERS5Q8N5B7 392 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 LINC00301Q8NCQ3 95 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 RBM28Q9NW13 759 aaKnown RBP22.19■■□□□ 1.14
BRF1-215ENST00000549655 DAGLAQ9Y4D2 1042 aa22.19■■□□□ 1.14
BRF1-215ENST00000549655 YEATS4O95619 227 aa22.18■■□□□ 1.14
BRF1-215ENST00000549655 U2AF2P26368 475 aaKnown RBP eCLIP22.18■■□□□ 1.141e-6■■■□□ 16.3
BRF1-215ENST00000549655 CHRNA5P30532 468 aa22.18■■□□□ 1.14
BRF1-215ENST00000549655 CAMK4Q16566 473 aa22.18■■□□□ 1.14
BRF1-215ENST00000549655 FUCA2Q9BTY2 467 aa22.18■■□□□ 1.14
BRF1-215ENST00000549655 FLT1P17948 1338 aa22.18■■□□□ 1.14
BRF1-215ENST00000549655 F8W031 263 aaPredicted RBP22.18■■□□□ 1.14
BRF1-215ENST00000549655 STK38Q15208 465 aa22.18■■□□□ 1.14
BRF1-215ENST00000549655 CCAR1Q8IX12 1150 aaKnown RBP22.18■■□□□ 1.14
BRF1-215ENST00000549655 RNF26Q9BY78 433 aaPredicted RBP22.18■■□□□ 1.14
BRF1-215ENST00000549655 MAP3K11Q16584 847 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 RCSD1Q6JBY9 416 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 KCNG4Q8TDN1 519 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.17■■□□□ 1.14
BRF1-215ENST00000549655 TNMDQ9H2S6 317 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 CLSTN2Q9H4D0 955 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 PCDHA7Q9UN72 937 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 SLX4Q8IY92 1834 aa22.17■■□□□ 1.14
BRF1-215ENST00000549655 PLEKHA8P1O95397 391 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 MMP1P03956 469 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 AKAP17AQ02040 695 aaKnown RBP22.16■■□□□ 1.14
BRF1-215ENST00000549655 FUT2Q10981 343 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 SLC44A5Q8NCS7 719 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 MXD3Q9BW11 206 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 IL17RBQ9NRM6 502 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 QSER1Q2KHR3 1735 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 MYH6P13533 1939 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 CCDC173Q0VFZ6 552 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 SF3A1Q15459 793 aaKnown RBP22.16■■□□□ 1.14
BRF1-215ENST00000549655 ZNF444Q8N0Y2 327 aaPredicted RBP22.16■■□□□ 1.14
BRF1-215ENST00000549655 CNKSR1Q969H4 720 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 KCNJ14Q9UNX9 436 aa22.16■■□□□ 1.14
BRF1-215ENST00000549655 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
BRF1-215ENST00000549655 SPTLC2O15270 562 aa22.15■■□□□ 1.14
BRF1-215ENST00000549655 SAFBQ15424 915 aaKnown RBP eCLIP22.15■■□□□ 1.14
BRF1-215ENST00000549655 DGKHQ86XP1 1220 aa22.15■■□□□ 1.14
BRF1-215ENST00000549655 CTCFLQ8NI51 663 aaPredicted RBP22.15■■□□□ 1.14
BRF1-215ENST00000549655 GOLPH3LQ9H4A5 285 aa22.15■■□□□ 1.14
BRF1-215ENST00000549655 DBNDD1Q9H9R9 158 aa22.15■■□□□ 1.14
BRF1-215ENST00000549655 ZNF287Q9HBT7 754 aa22.15■■□□□ 1.14
BRF1-215ENST00000549655 ZNF219Q9P2Y4 722 aaPredicted RBP22.15■■□□□ 1.14
BRF1-215ENST00000549655 DDX60LQ5H9U9 1706 aaKnown RBP22.15■■□□□ 1.14
BRF1-215ENST00000549655 PRPF3O43395 683 aaKnown RBP22.14■■□□□ 1.14
BRF1-215ENST00000549655 TSPY3P0CV98 308 aa22.14■■□□□ 1.14
BRF1-215ENST00000549655 TSPY8P0CW00 308 aa22.14■■□□□ 1.14
BRF1-215ENST00000549655 ADALQ6DHV7 355 aa22.14■■□□□ 1.14
BRF1-215ENST00000549655 TMTC3Q6ZXV5 915 aa22.14■■□□□ 1.14
BRF1-215ENST00000549655 PPP1R9BQ96SB3 815 aa22.14■■□□□ 1.14
BRF1-215ENST00000549655 CCDC73Q6ZRK6 1079 aa22.14■■□□□ 1.13
BRF1-215ENST00000549655 C16orf86Q6ZW13 317 aa22.14■■□□□ 1.13
BRF1-215ENST00000549655 PODNQ7Z5L7 613 aa22.14■■□□□ 1.13
BRF1-215ENST00000549655 KAT14Q9H8E8 782 aa22.14■■□□□ 1.13
BRF1-215ENST00000549655 V9GY48 417 aaPredicted RBP22.14■■□□□ 1.13
BRF1-215ENST00000549655 MYH1P12882 1939 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 USP17L3A6NCW0 530 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 USP17L4A6NCW7 530 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 BTBD18B2RXH4 712 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 CCDC192P0DO97 292 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 RASA1P20936 1047 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 SF3B2Q13435 895 aaKnown RBP22.13■■□□□ 1.13
BRF1-215ENST00000549655 PKN1Q16512 942 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 CCDC178Q5BJE1 867 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 USP17L1Q7RTZ2 530 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 NOSTRINQ8IVI9 506 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 CKAP2LQ8IYA6 745 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 DIS3L2Q8IYB7 885 aaKnown RBP22.13■■□□□ 1.13
BRF1-215ENST00000549655 FSIP1Q8NA03 581 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 ANKS1AQ92625 1134 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 PDGFDQ9GZP0 370 aaPredicted RBP22.13■■□□□ 1.13
BRF1-215ENST00000549655 TCP11L1Q9NUJ3 509 aa22.13■■□□□ 1.13
BRF1-215ENST00000549655 A0A1W2PQ27 194 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 A0A1W2PQ64 194 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 A0A1W2PQD8 194 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 CDK8P49336 464 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 SLC39A14Q15043 492 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 RBM43Q6ZSC3 357 aaKnown RBP22.12■■□□□ 1.13
BRF1-215ENST00000549655 FOCADQ5VW36 1801 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 hCG_1642624A0A1W2PR95 340 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 BAG6P46379 1132 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 SCNN1DP51172 638 aa22.12■■□□□ 1.13
BRF1-215ENST00000549655 SNW1Q13573 536 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms