RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 GDF11O95390 407 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 FGAP02671 866 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 ZBTB48P10074 688 aaPredicted RBP11.45□□□□□ -0.58
RAB5B-205ENST00000549034 PTPRAP18433 802 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 GJA5P36382 358 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
RAB5B-205ENST00000549034 GABPAQ06546 454 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
RAB5B-205ENST00000549034 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 MANSC4A6NHS7 340 aaPredicted RBP11.44□□□□□ -0.58
RAB5B-205ENST00000549034 USP17L5A8MUK1 530 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 IRF6O14896 467 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 SLC3A2P08195 630 aaKnown RBP11.44□□□□□ -0.58
RAB5B-205ENST00000549034 SHMT1P34896 483 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 TM4SF4P48230 202 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 GTF2A2P52657 109 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 INHBEP58166 350 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 JAG1P78504 1218 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 PPARAQ07869 468 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 ALX1Q15699 326 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 C16orf86Q6ZW13 317 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
RAB5B-205ENST00000549034 ZNF444Q8N0Y2 327 aaPredicted RBP11.44□□□□□ -0.58
RAB5B-205ENST00000549034 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 SLC44A5Q8NCS7 719 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 BEGAINQ9BUH8 593 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 SIPA1L1O43166 1804 aa11.44□□□□□ -0.58
RAB5B-205ENST00000549034 OTOFQ9HC10 1997 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 FOXP2O15409 715 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 GH2P01242 217 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 ASNSP08243 561 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 SREBF2Q12772 1141 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 SPP2Q13103 211 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 PPIL2Q13356 520 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
RAB5B-205ENST00000549034 CASC1Q6TDU7 716 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 KIAA1211Q6ZU35 1233 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 AS3MTQ9HBK9 375 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 ZNF287Q9HBT7 754 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 INCENPQ9NQS7 918 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
RAB5B-205ENST00000549034 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 CXCL11O14625 94 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 ZNF213O14771 459 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 SGSM2O43147 1006 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 CETPP11597 493 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 PDE4BQ07343 736 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 SNAPC2Q13487 334 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 CCL15Q16663 113 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 OTUD7BQ6GQQ9 843 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 ZNF280CQ8ND82 737 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 CCDC17Q96LX7 622 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 DSCC1Q9BVC3 393 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 IL25Q9H293 177 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 WBP1LQ9NX94 342 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 ZBTB21Q9ULJ3 1066 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 MYH8P13535 1937 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 ATAD5Q96QE3 1844 aa11.42□□□□□ -0.58
RAB5B-205ENST00000549034 TRIM75PA6NK02 468 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 CDC45O75419 566 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 PRDM1O75626 825 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 TRPA1O75762 1119 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 AKR1B1P15121 316 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 HAND2P61296 217 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 PTH1RQ03431 593 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 SEPT2Q15019 361 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 GADL1Q6ZQY3 521 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 ESYT1Q9BSJ8 1104 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 TOMM22Q9NS69 142 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 RNF186Q9NXI6 227 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
RAB5B-205ENST00000549034 DOCK1Q14185 1865 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 RAD50Q92878 1312 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
RAB5B-205ENST00000549034 HSPA1AP0DMV8 641 aaKnown RBP11.4□□□□□ -0.58
RAB5B-205ENST00000549034 HSPA1BP0DMV9 641 aaKnown RBP11.4□□□□□ -0.58
RAB5B-205ENST00000549034 RASA1P20936 1047 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
RAB5B-205ENST00000549034 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 FASTKD5Q7L8L6 764 aaKnown RBP11.4□□□□□ -0.58
RAB5B-205ENST00000549034 BRI3BPQ8WY22 251 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 PTPN18Q99952 460 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 KCNH4Q9UQ05 1017 aa11.4□□□□□ -0.58
RAB5B-205ENST00000549034 C19orf81C9J6K1 198 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 BTBD19C9JJ37 291 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms