RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CCAR1Q8IX12 1150 aaKnown RBP14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 SLC17A8Q8NDX2 589 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 TRIB2Q92519 343 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 PAGR1Q9BTK6 254 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 TBC1D2Q9BYX2 928 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 C1orf115Q9H7X2 142 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 TXNRD2Q9NNW7 524 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 USP17L10C9JJH3 530 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 SURF6O75683 361 aaKnown RBP14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 ZAP70P43403 619 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 TMEM57Q8N5G2 664 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 NUDT12Q9BQG2 462 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 CCDC8Q9H0W5 538 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 DHX36Q9H2U1 1008 aaKnown RBP14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 DNAJC18Q9H819 358 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
TRAFD1-205ENST00000548277 MAST2Q6P0Q8 1798 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 COL2A1P02458 1487 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 ASNSP08243 561 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 PLCG2P16885 1265 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 HERVK_113P62684 666 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 WDR18Q9BV38 432 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 PIH1D3Q9NQM4 214 aaKnown RBP14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 RBPJLQ9UBG7 517 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 MORF4L1Q9UBU8 362 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 FLT1P17948 1338 aa14.65□□□□□ -0.06
TRAFD1-205ENST00000548277 C19orf81C9J6K1 198 aa14.64□□□□□ -0.07
TRAFD1-205ENST00000548277 PRKAR2AP13861 404 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-205ENST00000548277 CYP7A1P22680 504 aa14.64□□□□□ -0.07
TRAFD1-205ENST00000548277 CCL14Q16627 93 aa14.64□□□□□ -0.07
TRAFD1-205ENST00000548277 MIGA1Q8NAN2 632 aa14.64□□□□□ -0.07
TRAFD1-205ENST00000548277 CWC22Q9HCG8 908 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-205ENST00000548277 IDH1O75874 414 aaKnown RBP14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 HLA-DOAP06340 250 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 CCND3P30281 292 aaPredicted RBP14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 HOXA7P31268 230 aaPredicted RBP14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 PPP4CP60510 307 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 ATP8B2P98198 1209 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 CACNB2Q08289 660 aaPredicted RBP14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 WDR78Q5VTH9 848 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 ANKLE1Q8NAG6 615 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 PORCNQ9H237 461 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 ZBTB21Q9ULJ3 1066 aa14.63□□□□□ -0.07
TRAFD1-205ENST00000548277 FRMPD3Q5JV73 1810 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 A0A1W2PPC1 479 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 DLL1O00548 723 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 GH2P01242 217 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 CAPN2P17655 700 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 USP5P45974 858 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 ERVK-9P63128 1117 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 ERVK-24P63145 666 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 GPR142Q7Z601 462 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 GDF15Q99988 308 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 OGDHLQ9ULD0 1010 aa14.62□□□□□ -0.07
TRAFD1-205ENST00000548277 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 ZKSCAN1P17029 563 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 MAGEA10P43363 369 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 POLA2Q14181 598 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 RAB3GAP1Q15042 981 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 USP17L2Q6R6M4 530 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 POTEEQ6S8J3 1075 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 Q7L0L9 218 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 PLEKHH3Q7Z736 793 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 MAGEB6Q8N7X4 407 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 FEZ1Q99689 392 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 GPR108Q9NPR9 543 aa14.61□□□□□ -0.07
TRAFD1-205ENST00000548277 MAPK4P31152 587 aa14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 RGS2P41220 211 aa14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 SSH3Q8TE77 659 aa14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 UBE2OQ9C0C9 1292 aaKnown RBP14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 MYH8P13535 1937 aa14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 PFASO15067 1338 aa14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
TRAFD1-205ENST00000548277 CNGA1P29973 690 aa14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 BMP8BP34820 402 aa14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 MAP3K21Q5TCX8 1036 aa14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 ITPRIPQ8IWB1 547 aa14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 DEFB123Q8N688 67 aa14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 SOCS4Q8WXH5 440 aa14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 EAF2Q96CJ1 260 aaPredicted RBP14.59□□□□□ -0.07
TRAFD1-205ENST00000548277 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 LRRC26Q2I0M4 334 aa14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 CERKLQ49MI3 558 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms