RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MAP2K2P36507 400 aa20.65■□□□□ 0.9
HDAC7-227ENST00000548080 TDO2P48775 406 aa20.65■□□□□ 0.9
HDAC7-227ENST00000548080 NOL9Q5SY16 702 aaKnown RBP20.65■□□□□ 0.9
HDAC7-227ENST00000548080 METTL16Q86W50 562 aaKnown RBP20.65■□□□□ 0.9
HDAC7-227ENST00000548080 RBM8AQ9Y5S9 174 aaKnown RBP20.65■□□□□ 0.9
HDAC7-227ENST00000548080 MYH8P13535 1937 aa20.65■□□□□ 0.9
HDAC7-227ENST00000548080 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 MINDY4BA8MYZ0 360 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 CTNND1O60716 968 aaKnown RBP20.64■□□□□ 0.89
HDAC7-227ENST00000548080 GNAT2P19087 354 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 RABEP1Q15276 862 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 ERO1BQ86YB8 467 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 IFNL3Q8IZI9 196 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 IL17RAQ96F46 866 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 PICK1Q9NRD5 415 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 PHIPQ8WWQ0 1821 aa20.64■□□□□ 0.89
HDAC7-227ENST00000548080 PATL2C9JE40 543 aaKnown RBP20.63■□□□□ 0.89
HDAC7-227ENST00000548080 HSPA1AP0DMV8 641 aaKnown RBP20.63■□□□□ 0.89
HDAC7-227ENST00000548080 HSPA1BP0DMV9 641 aaKnown RBP20.63■□□□□ 0.89
HDAC7-227ENST00000548080 SHMT1P34896 483 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 CAP2P40123 477 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 NECTIN1Q15223 517 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 C12orf60Q5U649 245 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 DSCC1Q9BVC3 393 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 EHD4Q9H223 541 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 TSKSQ9UJT2 592 aa20.63■□□□□ 0.89
HDAC7-227ENST00000548080 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
HDAC7-227ENST00000548080 IRF6O14896 467 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
HDAC7-227ENST00000548080 PTPRAP18433 802 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 GABPAQ06546 454 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 AMOTL1Q8IY63 956 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 KCNB2Q92953 911 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 ZHX2Q9Y6X8 837 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 HSPD1P10809 573 aaKnown RBP20.62■□□□□ 0.89
HDAC7-227ENST00000548080 BECN1Q14457 450 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 NAPBQ9H115 298 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 WBP1LQ9NX94 342 aa20.62■□□□□ 0.89
HDAC7-227ENST00000548080 ARPP21Q9UBL0 812 aaPredicted RBP20.62■□□□□ 0.89
HDAC7-227ENST00000548080 PPIL2Q13356 520 aa20.61■□□□□ 0.89
HDAC7-227ENST00000548080 CREB3L3Q68CJ9 461 aa20.61■□□□□ 0.89
HDAC7-227ENST00000548080 GIMAP6Q6P9H5 292 aa20.61■□□□□ 0.89
HDAC7-227ENST00000548080 SNX14Q9Y5W7 946 aa20.61■□□□□ 0.89
HDAC7-227ENST00000548080 SLC27A2O14975 620 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 GH2P01242 217 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 CDK8P49336 464 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 MAP2K1Q02750 393 aaPredicted RBP20.6■□□□□ 0.89
HDAC7-227ENST00000548080 PPATQ06203 517 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 CERKLQ49MI3 558 aaPredicted RBP20.6■□□□□ 0.89
HDAC7-227ENST00000548080 RNF20Q5VTR2 975 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 TATDN1Q6P1N9 297 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 RASEFQ8IZ41 740 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 MS4A4AQ96JQ5 239 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 NACAP1Q9BZK3 213 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
HDAC7-227ENST00000548080 CCL15-CCL14A0A0B4J2E2 113 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 TRIM75PA6NK02 468 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 FOXN1O15353 648 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
HDAC7-227ENST00000548080 CCL15Q16663 113 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 SBK1Q52WX2 424 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 C16orf86Q6ZW13 317 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 BRI3BPQ8WY22 251 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 SNX21Q969T3 373 aa20.59■□□□□ 0.89
HDAC7-227ENST00000548080 PTPRFP10586 1907 aa20.58■□□□□ 0.89
HDAC7-227ENST00000548080 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-227ENST00000548080 IGF2BP3O00425 579 aaKnown RBP eCLIP20.58■□□□□ 0.89
HDAC7-227ENST00000548080 MPHOSPH10O00566 681 aaKnown RBP20.58■□□□□ 0.89
HDAC7-227ENST00000548080 TRPA1O75762 1119 aa20.58■□□□□ 0.89
HDAC7-227ENST00000548080 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.89
HDAC7-227ENST00000548080 DGKZQ13574 1117 aa20.58■□□□□ 0.89
HDAC7-227ENST00000548080 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-227ENST00000548080 PRDM1O75626 825 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 AKR1B1P15121 316 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 GTF2A2P52657 109 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 SREBF2Q12772 1141 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 RAB3GAP1Q15042 981 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 ABCB5Q2M3G0 1257 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 CLEC10AQ8IUN9 316 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 PTPN18Q99952 460 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 INCENPQ9NQS7 918 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 AFG3L2Q9Y4W6 797 aa20.57■□□□□ 0.88
HDAC7-227ENST00000548080 USP17L5A8MUK1 530 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 FGAP02671 866 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 TM4SF4P48230 202 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 PPARAQ07869 468 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 SNAPC2Q13487 334 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 TSGA10IPQ3SY00 556 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 IL27Q8NEV9 243 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 BEGAINQ9BUH8 593 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 TBC1D2Q9BYX2 928 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 RNF186Q9NXI6 227 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 SWAP70Q9UH65 585 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 CTNNA3Q9UI47 895 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 KCNH4Q9UQ05 1017 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 ROBO3Q96MS0 1386 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 ASNSP08243 561 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 GUCY1A2P33402 732 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 HAND2P61296 217 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms