RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 PPARAQ07869 468 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 GRM1Q13255 1194 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 SPRYD7Q5W111 196 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 DYNLL2Q96FJ2 89 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 ANAPC4Q9UJX5 808 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 PTPRAP18433 802 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 PPIL2Q13356 520 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 ZBTB21Q9ULJ3 1066 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 PARP14Q460N5 1801 aa13.54□□□□□ -0.24
CALCOCO1-208ENST00000547988 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 GDF11O95390 407 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 GJA5P36382 358 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 PDE4BQ07343 736 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 ABCB5Q2M3G0 1257 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 KIAA1211Q6ZU35 1233 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 PCNTO95613 3336 aa13.53□□□□□ -0.24
CALCOCO1-208ENST00000547988 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 AOC2O75106 756 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 GH2P01242 217 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 JMYQ8N9B5 988 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO1-208ENST00000547988 PLIN4Q96Q06 1357 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 ZNF213O14771 459 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 IRF6O14896 467 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 RASA1P20936 1047 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 GTF2A2P52657 109 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 INHBEP58166 350 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 JAG1P78504 1218 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 KIF23Q02241 960 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 PTH1RQ03431 593 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 SREBF2Q12772 1141 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 MKRN3Q13064 507 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 MAP4K1Q92918 833 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 AFG3L2Q9Y4W6 797 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
CALCOCO1-208ENST00000547988 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 CXCL11O14625 94 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 ORC4O43929 436 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 FGRP09769 529 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 AKR1B1P15121 316 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 NT5C2P49902 561 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 HAND2P61296 217 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 SNAPC2Q13487 334 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 ZNF444Q8N0Y2 327 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 STK11IPQ8N1F8 1099 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 WDR18Q9BV38 432 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
CALCOCO1-208ENST00000547988 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 CETPP11597 493 aa13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 TM4SF4P48230 202 aa13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 MAP2K1Q02750 393 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 ZIC5Q96T25 663 aa13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
CALCOCO1-208ENST00000547988 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 TRIM75PA6NK02 468 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 PRDM1O75626 825 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 REC8O95072 547 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 SPP2Q13103 211 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 SEPT2Q15019 361 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 CCL15Q16663 113 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 RLFQ13129 1914 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 MGAMO43451 1857 aa13.48□□□□□ -0.25
CALCOCO1-208ENST00000547988 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms