RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TNNI3KQ59H18 835 aa9.38□□□□□ -0.91
NPAS3-204ENST00000546849 PAOXQ6QHF9 649 aa9.38□□□□□ -0.91
NPAS3-204ENST00000546849 TMEM87BQ96K49 555 aa9.38□□□□□ -0.91
NPAS3-204ENST00000546849 ZNF408Q9H9D4 720 aa9.38□□□□□ -0.91
NPAS3-204ENST00000546849 LGR6Q9HBX8 967 aa9.38□□□□□ -0.91
NPAS3-204ENST00000546849 FAM95CA0A1B0GW59 222 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 U2SURPO15042 1029 aaKnown RBP9.37□□□□□ -0.91
NPAS3-204ENST00000546849 NFICP08651 508 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 PPP2R5EQ16537 467 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 TMEM201Q5SNT2 666 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 SLC6A19Q695T7 634 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 OVOS1Q6IE37 1185 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
NPAS3-204ENST00000546849 TP53INP1Q96A56 240 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 DNAJC2Q99543 621 aaKnown RBP9.37□□□□□ -0.91
NPAS3-204ENST00000546849 TRIM55Q9BYV6 548 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 SEMA6BQ9H3T3 888 aa9.37□□□□□ -0.91
NPAS3-204ENST00000546849 GSX1Q9H4S2 264 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-204ENST00000546849 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
NPAS3-204ENST00000546849 ARSHQ5FYA8 562 aa9.36□□□□□ -0.91
NPAS3-204ENST00000546849 LSRQ86X29 649 aaPredicted RBP9.36□□□□□ -0.91
NPAS3-204ENST00000546849 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
NPAS3-204ENST00000546849 ACSF2Q96CM8 615 aaPredicted RBP9.36□□□□□ -0.91
NPAS3-204ENST00000546849 SHDQ96IW2 340 aa9.36□□□□□ -0.91
NPAS3-204ENST00000546849 ACSS3Q9H6R3 686 aa9.36□□□□□ -0.91
NPAS3-204ENST00000546849 TJP2Q9UDY2 1190 aa9.36□□□□□ -0.91
NPAS3-204ENST00000546849 IGSF3O75054 1194 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 GIPRP48546 466 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 BEND4Q6ZU67 534 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 ARMCX6Q7L4S7 300 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 NLRC3Q7RTR2 1065 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 MCATQ8IVS2 390 aaKnown RBP9.35□□□□□ -0.91
NPAS3-204ENST00000546849 FAM20CQ8IXL6 584 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 MRPL41Q8IXM3 137 aaKnown RBP9.35□□□□□ -0.91
NPAS3-204ENST00000546849 GIMAP7Q8NHV1 300 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 XAGE3Q8WTP9 111 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 TM9SF2Q99805 663 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 DPH2Q9BQC3 489 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-204ENST00000546849 FOXQ1Q9C009 403 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 SEMA6CQ9H3T2 930 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 FBRSQ9HAH7 460 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
NPAS3-204ENST00000546849 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
NPAS3-204ENST00000546849 LRIG2O94898 1065 aa9.34□□□□□ -0.91
NPAS3-204ENST00000546849 ETFBP38117 255 aa9.34□□□□□ -0.91
NPAS3-204ENST00000546849 PRAMEF13Q5VWM6 474 aa9.34□□□□□ -0.91
NPAS3-204ENST00000546849 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
NPAS3-204ENST00000546849 RBBP8NLQ8NC74 664 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-204ENST00000546849 ACTR10Q9NZ32 417 aa9.34□□□□□ -0.91
NPAS3-204ENST00000546849 SLC22A31A6NKX4 558 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 CHURC1-FNTBB4DL54 471 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
NPAS3-204ENST00000546849 CST3P01034 146 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-204ENST00000546849 GUCY2CP25092 1073 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 GBP1P32455 592 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 NTF4P34130 210 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 NKG7Q16617 165 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 RSPO4Q2I0M5 234 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-204ENST00000546849 ARMC10Q8N2F6 343 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 SLC12A7Q9Y666 1083 aa9.33□□□□□ -0.92
NPAS3-204ENST00000546849 NKAPLQ5M9Q1 402 aa9.32□□□□□ -0.92
NPAS3-204ENST00000546849 MFSD2AQ8NA29 543 aa9.32□□□□□ -0.92
NPAS3-204ENST00000546849 EZH1Q92800 747 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-204ENST00000546849 ATG4CQ96DT6 458 aa9.32□□□□□ -0.92
NPAS3-204ENST00000546849 CCDC74BQ96LY2 380 aa9.32□□□□□ -0.92
NPAS3-204ENST00000546849 STOML1Q9UBI4 398 aa9.32□□□□□ -0.92
NPAS3-204ENST00000546849 FAM86C2PA6NEL3 165 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 UPK3BL1B0FP48 263 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 UPK3BL2E5RIL1 263 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 NME1P15531 152 aaKnown RBP9.31□□□□□ -0.92
NPAS3-204ENST00000546849 LARP1BQ659C4 914 aaKnown RBP9.31□□□□□ -0.92
NPAS3-204ENST00000546849 UBE3DQ7Z6J8 389 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 CLEC10AQ8IUN9 316 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 SLFN12Q8IYM2 578 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 CYB5D2Q8WUJ1 264 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 MIPEPQ99797 713 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 TPSG1Q9NRR2 321 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 RAXQ9Y2V3 346 aa9.31□□□□□ -0.92
NPAS3-204ENST00000546849 CAP2P40123 477 aa9.3□□□□□ -0.92
NPAS3-204ENST00000546849 SLBPQ14493 270 aaKnown RBP eCLIP9.3□□□□□ -0.92
NPAS3-204ENST00000546849 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
NPAS3-204ENST00000546849 RUFY4Q6ZNE9 571 aa9.3□□□□□ -0.92
NPAS3-204ENST00000546849 HNRNPLLQ8WVV9 542 aaKnown RBP9.3□□□□□ -0.92
NPAS3-204ENST00000546849 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
NPAS3-204ENST00000546849 CNNM2Q9H8M5 875 aa9.3□□□□□ -0.92
NPAS3-204ENST00000546849 DNAJA2O60884 412 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 CDK5R2Q13319 367 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 CDCP2Q5VXM1 449 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 ZNF746Q6NUN9 644 aaPredicted RBP9.29□□□□□ -0.92
NPAS3-204ENST00000546849 TAB3Q8N5C8 712 aaPredicted RBP9.29□□□□□ -0.92
NPAS3-204ENST00000546849 TOP6BLQ8N6T0 577 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 FAM169BQ8N8A8 192 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 C19orf47Q8N9M1 422 aaKnown RBP9.29□□□□□ -0.92
NPAS3-204ENST00000546849 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 KIF2CQ99661 725 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 FAM83CQ9BQN1 747 aa9.29□□□□□ -0.92
NPAS3-204ENST00000546849 CCNFP41002 786 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms