RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 USP17L5A8MUK1 530 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 CA12O43570 354 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 SLC3A2P08195 630 aaKnown RBP20.05■□□□□ 0.8
CCDC38-203ENST00000546803 CDK8P49336 464 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 CCDC17Q96LX7 622 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 CABP5Q9NP86 173 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 ZBTB21Q9ULJ3 1066 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
CCDC38-203ENST00000546803 ZMYM6O95789 1325 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 GDF11O95390 407 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 CETPP11597 493 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 SLC44A5Q8NCS7 719 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 AS3MTQ9HBK9 375 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 ROBO3Q96MS0 1386 aa20.04■□□□□ 0.8
CCDC38-203ENST00000546803 DDX60LQ5H9U9 1706 aaKnown RBP20.04■□□□□ 0.8
CCDC38-203ENST00000546803 SMIM22K7EJ46 135 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 GH2P01242 217 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 FGAP02671 866 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 PPARAQ07869 468 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 OTUD7BQ6GQQ9 843 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 WDR18Q9BV38 432 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 DSCC1Q9BVC3 393 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 AK9Q5TCS8 1911 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
CCDC38-203ENST00000546803 CCL15-CCL14A0A0B4J2E2 113 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 ALDH1A1P00352 501 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
CCDC38-203ENST00000546803 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
CCDC38-203ENST00000546803 JAG1P78504 1218 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 CCL15Q16663 113 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 ZNF280CQ8ND82 737 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 MKNK2Q9HBH9 465 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 SAGE1Q9NXZ1 904 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 ANAPC4Q9UJX5 808 aa20.02■□□□□ 0.8
CCDC38-203ENST00000546803 NAV1Q8NEY1 1877 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 SGSM2O43147 1006 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 PDE4BQ07343 736 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 TMEM179Q6ZVK1 233 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 IFNL1Q8IU54 200 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 BRI3BPQ8WY22 251 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.01■□□□□ 0.79
CCDC38-203ENST00000546803 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
CCDC38-203ENST00000546803 SIPA1L1O43166 1804 aa20■□□□□ 0.79
CCDC38-203ENST00000546803 SPP2Q13103 211 aa20■□□□□ 0.79
CCDC38-203ENST00000546803 CASC1Q6TDU7 716 aa20■□□□□ 0.79
CCDC38-203ENST00000546803 FASTKD5Q7L8L6 764 aaKnown RBP20■□□□□ 0.79
CCDC38-203ENST00000546803 CCDC84Q86UT8 332 aaPredicted RBP20■□□□□ 0.79
CCDC38-203ENST00000546803 IL25Q9H293 177 aa20■□□□□ 0.79
CCDC38-203ENST00000546803 RNF186Q9NXI6 227 aa20■□□□□ 0.79
CCDC38-203ENST00000546803 CTNNA3Q9UI47 895 aa20■□□□□ 0.79
CCDC38-203ENST00000546803 A0A0G2JLL6 359 aaPredicted RBP19.99■□□□□ 0.79
CCDC38-203ENST00000546803 TRIM75PA6NK02 468 aa19.99■□□□□ 0.79
CCDC38-203ENST00000546803 MPHOSPH10O00566 681 aaKnown RBP19.99■□□□□ 0.79
CCDC38-203ENST00000546803 RAB3GAP1Q15042 981 aa19.99■□□□□ 0.79
CCDC38-203ENST00000546803 SHROOM1Q2M3G4 852 aaPredicted RBP19.99■□□□□ 0.79
CCDC38-203ENST00000546803 PRRT2Q7Z6L0 340 aaPredicted RBP19.99■□□□□ 0.79
CCDC38-203ENST00000546803 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
CCDC38-203ENST00000546803 PTPN18Q99952 460 aa19.99■□□□□ 0.79
CCDC38-203ENST00000546803 ZCCHC17Q9NP64 241 aaKnown RBP19.99■□□□□ 0.79
CCDC38-203ENST00000546803 MYH1P12882 1939 aa19.99■□□□□ 0.79
CCDC38-203ENST00000546803 C19orf81C9J6K1 198 aa19.98■□□□□ 0.79
CCDC38-203ENST00000546803 IGF2BP3O00425 579 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCDC38-203ENST00000546803 CDC45O75419 566 aa19.98■□□□□ 0.79
CCDC38-203ENST00000546803 AKR1B1P15121 316 aa19.98■□□□□ 0.79
CCDC38-203ENST00000546803 RASA1P20936 1047 aa19.98■□□□□ 0.79
CCDC38-203ENST00000546803 STK11IPQ8N1F8 1099 aa19.98■□□□□ 0.79
CCDC38-203ENST00000546803 USP17L10C9JJH3 530 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 TRPA1O75762 1119 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 PCP11498 1178 aaKnown RBP19.97■□□□□ 0.79
CCDC38-203ENST00000546803 GUCY1A2P33402 732 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 CTCFP49711 727 aaPredicted RBP19.97■□□□□ 0.79
CCDC38-203ENST00000546803 BACE1P56817 501 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 SEPT2Q15019 361 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 SH3D19Q5HYK7 790 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 ANKRD23Q86SG2 305 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 ESYT1Q9BSJ8 1104 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 CFHR5Q9BXR6 569 aa19.97■□□□□ 0.79
CCDC38-203ENST00000546803 BTBD19C9JJ37 291 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 ZNF213O14771 459 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 FGRP09769 529 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 MOGSQ13724 837 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 KIAA1211Q6ZU35 1233 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 PROCA1Q8NCQ7 364 aaPredicted RBP19.96■□□□□ 0.79
CCDC38-203ENST00000546803 KANSL2Q9H9L4 492 aa19.96■□□□□ 0.79
CCDC38-203ENST00000546803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCDC38-203ENST00000546803 FOXN1O15353 648 aa19.95■□□□□ 0.78
CCDC38-203ENST00000546803 PRDM1O75626 825 aa19.95■□□□□ 0.78
CCDC38-203ENST00000546803 MTMR2Q13614 643 aa19.95■□□□□ 0.78
CCDC38-203ENST00000546803 IMMTQ16891 758 aaKnown RBP19.95■□□□□ 0.78
CCDC38-203ENST00000546803 FAM43AQ8N2R8 423 aa19.95■□□□□ 0.78
CCDC38-203ENST00000546803 KIAA1683Q9H0B3 1180 aa19.95■□□□□ 0.78
CCDC38-203ENST00000546803 RNF41Q9H4P4 317 aaPredicted RBP19.95■□□□□ 0.78
CCDC38-203ENST00000546803 TMOD4Q9NZQ9 345 aa19.95■□□□□ 0.78
CCDC38-203ENST00000546803 U3KPZ7 1027 aaPredicted RBP19.95■□□□□ 0.78
CCDC38-203ENST00000546803 ORC4O43929 436 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms