RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 EPHA4P54764 986 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 CAP1Q01518 475 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 TEFQ10587 303 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 MOB2Q70IA6 237 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 TIMMDC1Q9NPL8 285 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
CCDC60-205ENST00000546345 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 IQSEC3Q9UPP2 1182 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-205ENST00000546345 VCANP13611 3396 aa8.84□□□□□ -0.99
CCDC60-205ENST00000546345 PSMD14O00487 310 aa8.83□□□□□ -1
CCDC60-205ENST00000546345 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
CCDC60-205ENST00000546345 FOXK2Q01167 660 aa8.83□□□□□ -1
CCDC60-205ENST00000546345 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
CCDC60-205ENST00000546345 SLC17A8Q8NDX2 589 aa8.83□□□□□ -1
CCDC60-205ENST00000546345 SSC5DA1L4H1 1573 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 H0YGN5 161 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 TNIP1Q15025 636 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 TBCELQ5QJ74 424 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 SUSD4Q5VX71 490 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 OTOP1Q7RTM1 612 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 NPM2Q86SE8 214 aaKnown RBP8.82□□□□□ -1
CCDC60-205ENST00000546345 CCDC155Q8N6L0 562 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 DPF2Q92785 391 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 NYXQ9GZU5 481 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 TSPAN10Q9H1Z9 355 aaPredicted RBP8.82□□□□□ -1
CCDC60-205ENST00000546345 DYRK1BQ9Y463 629 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 USP3Q9Y6I4 520 aa8.82□□□□□ -1
CCDC60-205ENST00000546345 MAP3K15Q6ZN16 1313 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 A0A1B0GUL6 1792 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 GNAT3A8MTJ3 354 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 H7C1D1 291 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 FKTNO75072 461 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 PPFIA3O75145 1194 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 GPTP24298 496 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 SWI5Q1ZZU3 235 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 KIF4BQ2VIQ3 1234 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 MORC1Q86VD1 984 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 GAS2L2Q8NHY3 880 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 STK32AQ8WU08 396 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 ARMC5Q96C12 935 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 RBM17Q96I25 401 aaKnown RBP8.81□□□□□ -1
CCDC60-205ENST00000546345 ANP32EQ9BTT0 268 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 PRO3102Q9H379 93 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 PANK3Q9H999 370 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 KCNQ5Q9NR82 932 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 CHMP3Q9Y3E7 222 aa8.81□□□□□ -1
CCDC60-205ENST00000546345 BTBD11A6QL63 1104 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 LGR5O75473 907 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 SNRPA1P09661 255 aaKnown RBP8.8□□□□□ -1
CCDC60-205ENST00000546345 PLA2G4AP47712 749 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 TM4SF4P48230 202 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 TEAD4Q15561 434 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 DPP8Q6V1X1 898 aaPredicted RBP8.8□□□□□ -1
CCDC60-205ENST00000546345 TTLL7Q6ZT98 887 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 SUPT20HQ8NEM7 779 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 SCG3Q8WXD2 468 aaKnown RBP8.8□□□□□ -1
CCDC60-205ENST00000546345 DCPSQ96C86 337 aaKnown RBP8.8□□□□□ -1
CCDC60-205ENST00000546345 GAS2L1Q99501 681 aaPredicted RBP8.8□□□□□ -1
CCDC60-205ENST00000546345 DBNDD1Q9H9R9 158 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 MGAMO43451 1857 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 EYSQ5T1H1 3165 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 MYH3P11055 1940 aa8.8□□□□□ -1
CCDC60-205ENST00000546345 A0A1B0GTH6 734 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
CCDC60-205ENST00000546345 PPP1R12BO60237 982 aaPredicted RBP8.79□□□□□ -1
CCDC60-205ENST00000546345 NOS2P35228 1153 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
CCDC60-205ENST00000546345 FKBP1BP68106 108 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 TMEM164Q5U3C3 297 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
CCDC60-205ENST00000546345 ZNF34Q8IZ26 560 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 ZNF295-AS1Q8N0V1 137 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
CCDC60-205ENST00000546345 TRIM17Q9Y577 477 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 SPTBN5Q9NRC6 3674 aaKnown RBP8.79□□□□□ -1
CCDC60-205ENST00000546345 PITPNM2Q9BZ72 1349 aa8.79□□□□□ -1
CCDC60-205ENST00000546345 SERTM1A2A2V5 107 aa8.78□□□□□ -1
CCDC60-205ENST00000546345 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
CCDC60-205ENST00000546345 UBE2Q2LH0YL09 131 aa8.78□□□□□ -1
CCDC60-205ENST00000546345 SOX1O00570 391 aaPredicted RBP8.78□□□□□ -1
CCDC60-205ENST00000546345 F11P03951 625 aa8.78□□□□□ -1
CCDC60-205ENST00000546345 RPS12P25398 132 aaKnown RBP8.78□□□□□ -1
CCDC60-205ENST00000546345 ANGEL2Q5VTE6 544 aaKnown RBP8.78□□□□□ -1
CCDC60-205ENST00000546345 SP8Q8IXZ3 490 aa8.78□□□□□ -1
CCDC60-205ENST00000546345 ZNF775Q96BV0 537 aaPredicted RBP8.78□□□□□ -1
CCDC60-205ENST00000546345 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1
CCDC60-205ENST00000546345 IGFBP4P22692 258 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 ITGA6P23229 1130 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 RIPOR1Q6ZS17 1223 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 ZDHHC1Q8WTX9 485 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 ZNF333Q96JL9 665 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 PHACTR3Q96KR7 559 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 POLR3GLQ9BT43 218 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 PTPN22Q9Y2R2 807 aa8.77□□□□□ -1.01
CCDC60-205ENST00000546345 ECE2O60344 883 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms