RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PI16Q6UXB8 463 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 APTXQ7Z2E3 356 aaKnown RBP16.14■□□□□ 0.17
SRP54-202ENST00000546080 CNGA4Q8IV77 575 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 DIS3L2Q8IYB7 885 aaKnown RBP16.14■□□□□ 0.17
SRP54-202ENST00000546080 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 MEGF6O75095 1541 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 FMNL1O95466 1100 aaPredicted RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 NOP2P46087 812 aaKnown RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 CABP4P57796 275 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 ZNF579Q8NAF0 562 aaKnown RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 LY9Q9HBG7 655 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 FAM217BQ9NTX9 383 aaPredicted RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 MKRN1Q9UHC7 482 aaKnown RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 CASP14P31944 242 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 PBX1P40424 430 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 CT47A1Q5JQC4 288 aaPredicted RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 SPATA20Q8TB22 786 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 IGDCC4Q8TDY8 1250 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 CCDC51Q96ER9 411 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 CDC5LQ99459 802 aaKnown RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 MED4Q9NPJ6 270 aa16.13■□□□□ 0.17
SRP54-202ENST00000546080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.172e-9■■■□□ 17
SRP54-202ENST00000546080 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
SRP54-202ENST00000546080 MYH7P12883 1935 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 PHACTR2O75167 634 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 ADD2P35612 726 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 STX17P56962 302 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
SRP54-202ENST00000546080 FOXR1Q6PIV2 292 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 ACRBPQ8NEB7 543 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 ORAI2Q96SN7 254 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 SEC31BQ9NQW1 1179 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 KCNJ14Q9UNX9 436 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 CEP131Q9UPN4 1083 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
SRP54-202ENST00000546080 SLC12A7Q9Y666 1083 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
SRP54-202ENST00000546080 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
SRP54-202ENST00000546080 MAGEA9P43362 315 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 TAF7LQ5H9L4 462 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 FOXP1Q9H334 677 aaPredicted RBP16.11■□□□□ 0.17
SRP54-202ENST00000546080 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 PCDHB6Q9Y5E3 794 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 GLI3P10071 1580 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 GYPCP04921 128 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 TRIM22Q8IYM9 498 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 MYO1AQ9UBC5 1043 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 ATRNO75882 1429 aa16.11■□□□□ 0.17
SRP54-202ENST00000546080 SEMA3EO15041 775 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 IFNAR1P17181 557 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 GUCY1A2P33402 732 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 FXR1P51114 621 aaKnown RBP eCLIP16.1■□□□□ 0.17
SRP54-202ENST00000546080 CDKAL1Q5VV42 579 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 ITIH6Q6UXX5 1313 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 LRRIQ3A6PVS8 624 aaPredicted RBP16.1■□□□□ 0.17
SRP54-202ENST00000546080 EIF3CLB5ME19 914 aaKnown RBP16.1■□□□□ 0.17
SRP54-202ENST00000546080 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
SRP54-202ENST00000546080 CYP27B1O15528 508 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
SRP54-202ENST00000546080 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 FECHP22830 423 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 LIFRP42702 1097 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 CUL4BQ13620 913 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 TTC31Q49AM3 519 aaPredicted RBP16.1■□□□□ 0.17
SRP54-202ENST00000546080 LRRC31Q6UY01 552 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 EIF3CQ99613 913 aaKnown RBP16.1■□□□□ 0.17
SRP54-202ENST00000546080 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
SRP54-202ENST00000546080 WDR17Q8IZU2 1322 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 MCAMP43121 646 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 AFMP43652 599 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 WDR93Q6P2C0 686 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 USP49Q70CQ1 688 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
SRP54-202ENST00000546080 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
SRP54-202ENST00000546080 ERVK-24P63145 666 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 NR5A1Q13285 461 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
SRP54-202ENST00000546080 RNF40O75150 1001 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.16
SRP54-202ENST00000546080 ABL1P00519 1130 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 TTF1Q15361 905 aaPredicted RBP16.08■□□□□ 0.16
SRP54-202ENST00000546080 NCAPH2Q6IBW4 605 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 ABHD10Q9NUJ1 306 aa16.08■□□□□ 0.16
SRP54-202ENST00000546080 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
SRP54-202ENST00000546080 CCT6AP40227 531 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms