RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 FOXP4Q8IVH2 680 aaPredicted RBP20.5■□□□□ 0.87
CPSF7-225ENST00000545934 C7orf61Q8IZ16 206 aa20.5■□□□□ 0.87
CPSF7-225ENST00000545934 GINM1Q9NU53 330 aa20.5■□□□□ 0.87
CPSF7-225ENST00000545934 PEX10O60683 326 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 IGSF3O75054 1194 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 PLCG2P16885 1265 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 SHROOM1Q2M3G4 852 aaPredicted RBP20.49■□□□□ 0.87
CPSF7-225ENST00000545934 NAA16Q6N069 864 aaPredicted RBP20.49■□□□□ 0.87
CPSF7-225ENST00000545934 POTEEQ6S8J3 1075 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 USP6NLQ92738 828 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 NOL10Q9BSC4 688 aaKnown RBP20.49■□□□□ 0.87
CPSF7-225ENST00000545934 RBPJLQ9UBG7 517 aa20.49■□□□□ 0.87
CPSF7-225ENST00000545934 CYP2E1P05181 493 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-225ENST00000545934 CYP2B6P20813 491 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 IRX3P78415 501 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-225ENST00000545934 POLA2Q14181 598 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 TNNI3KQ59H18 835 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 GPR153Q6NV75 609 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 MAPKAPK5Q8IW41 473 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 GPRC5AQ8NFJ5 357 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 TGFBRAP1Q8WUH2 860 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 ZNF512BQ96KM6 892 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-225ENST00000545934 C11orf49Q9H6J7 331 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 SNRKQ9NRH2 765 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 TMOD4Q9NZQ9 345 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 ZBTB21Q9ULJ3 1066 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 FPGT-TNNI3KV9GXZ4 949 aa20.48■□□□□ 0.87
CPSF7-225ENST00000545934 USP17L10C9JJH3 530 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 IPO8O15397 1037 aaKnown RBP20.47■□□□□ 0.87
CPSF7-225ENST00000545934 Q3C1V9 767 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 SOCS4Q8WXH5 440 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 NUDT12Q9BQG2 462 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 DBNDD2Q9BQY9 259 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 ZMYND8Q9ULU4 1186 aaPredicted RBP20.47■□□□□ 0.87
CPSF7-225ENST00000545934 NAV1Q8NEY1 1877 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 PFASO15067 1338 aa20.47■□□□□ 0.87
CPSF7-225ENST00000545934 COL6A1P12109 1028 aa20.46■□□□□ 0.87
CPSF7-225ENST00000545934 PRKAR2AP13861 404 aaKnown RBP20.46■□□□□ 0.87
CPSF7-225ENST00000545934 TRMT44Q8IYL2 757 aaKnown RBP20.46■□□□□ 0.87
CPSF7-225ENST00000545934 SSH3Q8TE77 659 aa20.46■□□□□ 0.87
CPSF7-225ENST00000545934 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
CPSF7-225ENST00000545934 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
CPSF7-225ENST00000545934 RLFQ13129 1914 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 BCAR3O75815 825 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 GDF11O95390 407 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 MAPK4P31152 587 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 ERVK-9P63128 1117 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 ERVK-24P63145 666 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 TTC39AQ5SRH9 613 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 MORN1Q5T089 497 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 GTF3C2Q8WUA4 911 aaPredicted RBP20.45■□□□□ 0.86
CPSF7-225ENST00000545934 MYH8P13535 1937 aa20.45■□□□□ 0.86
CPSF7-225ENST00000545934 CACNB2Q08289 660 aaPredicted RBP20.44■□□□□ 0.86
CPSF7-225ENST00000545934 LRIT3Q3SXY7 679 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 CCDC158Q5M9N0 1113 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 LHX8Q68G74 356 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 SLC17A8Q8NDX2 589 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 C12orf42Q96LP6 360 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 PORCNQ9H237 461 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 PIH1D3Q9NQM4 214 aaKnown RBP20.44■□□□□ 0.86
CPSF7-225ENST00000545934 A0A0G2JMZ2 1700 aa20.44■□□□□ 0.86
CPSF7-225ENST00000545934 LTBP2Q14767 1821 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 ZNF236Q9UL36 1845 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 SYN1P17600 705 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 MAGEA10P43363 369 aaPredicted RBP20.43■□□□□ 0.86
CPSF7-225ENST00000545934 ZAP70P43403 619 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 TATDN1Q6P1N9 297 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 GPR142Q7Z601 462 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 CRACR2BQ8N4Y2 399 aaPredicted RBP20.43■□□□□ 0.86
CPSF7-225ENST00000545934 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
CPSF7-225ENST00000545934 ZKSCAN1P17029 563 aaPredicted RBP20.42■□□□□ 0.86
CPSF7-225ENST00000545934 RGS2P41220 211 aa20.42■□□□□ 0.86
CPSF7-225ENST00000545934 DYNLL1P63167 89 aaKnown RBP20.42■□□□□ 0.86
CPSF7-225ENST00000545934 ATP8B2P98198 1209 aa20.42■□□□□ 0.86
CPSF7-225ENST00000545934 CCL14Q16627 93 aa20.42■□□□□ 0.86
CPSF7-225ENST00000545934 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
CPSF7-225ENST00000545934 CLUAP1Q96AJ1 413 aa20.42■□□□□ 0.86
CPSF7-225ENST00000545934 CNMDO75829 334 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 HLA-DOAP06340 250 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 CCND3P30281 292 aaPredicted RBP20.41■□□□□ 0.86
CPSF7-225ENST00000545934 PDE3AQ14432 1141 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 PLEKHH3Q7Z736 793 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 TDHQ8IZJ6 230 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 FRAT1Q92837 279 aaPredicted RBP20.41■□□□□ 0.86
CPSF7-225ENST00000545934 APBA2Q99767 749 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 TRIM34Q9BYJ4 488 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 SAP30BPQ9UHR5 308 aaKnown RBP20.41■□□□□ 0.86
CPSF7-225ENST00000545934 DBNLQ9UJU6 430 aaKnown RBP20.41■□□□□ 0.86
CPSF7-225ENST00000545934 NOP58Q9Y2X3 529 aaKnown RBP20.41■□□□□ 0.86
CPSF7-225ENST00000545934 DNAH12Q6ZR08 3092 aa20.41■□□□□ 0.86
CPSF7-225ENST00000545934 DLL1O00548 723 aa20.4■□□□□ 0.86
CPSF7-225ENST00000545934 ZNFX1Q9P2E3 1918 aaKnown RBP20.4■□□□□ 0.86
CPSF7-225ENST00000545934 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
CPSF7-225ENST00000545934 GH2P01242 217 aa20.39■□□□□ 0.85
CPSF7-225ENST00000545934 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
CPSF7-225ENST00000545934 EHD4Q9H223 541 aa20.39■□□□□ 0.85
CPSF7-225ENST00000545934 TLR7Q9NYK1 1049 aaKnown RBP20.39■□□□□ 0.85
CPSF7-225ENST00000545934 RABGAP1Q9Y3P9 1069 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms