RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 FRAT1Q92837 279 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-223ENST00000545440 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 JAG2Q9Y219 1238 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
SNHG1-223ENST00000545440 SSC5DA1L4H1 1573 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 F8W031 263 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-223ENST00000545440 CA12O43570 354 aa9.53□□□□□ -0.88
SNHG1-223ENST00000545440 NF2P35240 595 aa9.53□□□□□ -0.88
SNHG1-223ENST00000545440 IL15P40933 162 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-223ENST00000545440 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
SNHG1-223ENST00000545440 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-223ENST00000545440 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
SNHG1-223ENST00000545440 PRDM10Q9NQV6 1147 aa9.53□□□□□ -0.88
SNHG1-223ENST00000545440 TTF2Q9UNY4 1162 aaKnown RBP9.53□□□□□ -0.88
SNHG1-223ENST00000545440 PPP2R3BQ9Y5P8 575 aa9.53□□□□□ -0.88
SNHG1-223ENST00000545440 FAM155AB1AL88 458 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-223ENST00000545440 SRGAP3O43295 1099 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 AOC2O75106 756 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 ATP2B3Q16720 1220 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 BPHLQ86WA6 291 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-223ENST00000545440 NKX2-3Q8TAU0 364 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 SIL1Q9H173 461 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 TNNQ9UQP3 1299 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 SUGT1Q9Y2Z0 365 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 MYH7P12883 1935 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 MAST3O60307 1309 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 ATAD5Q96QE3 1844 aa9.52□□□□□ -0.89
SNHG1-223ENST00000545440 PTPRFP10586 1907 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 GNAI2P04899 355 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 HSPA8P11142 646 aaKnown RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 ZNF157P51786 506 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 HDLBPQ00341 1268 aaKnown RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 PDE4CQ08493 712 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 TNFAIP1Q13829 316 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 RASAL3Q86YV0 1011 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 FTSJ3Q8IY81 847 aaKnown RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 TMEM57Q8N5G2 664 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 PRMT6Q96LA8 375 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 DEFB129Q9H1M3 183 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 CEP126Q9P2H0 1117 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 SCAF8Q9UPN6 1271 aaKnown RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 IQSEC3Q9UPP2 1182 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 PA2G4Q9UQ80 394 aaKnown RBP9.51□□□□□ -0.89
SNHG1-223ENST00000545440 PCDHAC2Q9Y5I4 1007 aa9.51□□□□□ -0.89
SNHG1-223ENST00000545440 CRKP46108 304 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 RBM5P52756 815 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNHG1-223ENST00000545440 LBX1P52954 281 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 CHAF1AQ13111 956 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-223ENST00000545440 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 WDR66Q8TBY9 1149 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 GNL3LQ9NVN8 582 aaKnown RBP9.5□□□□□ -0.89
SNHG1-223ENST00000545440 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 DOCK1Q14185 1865 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 AOX1Q06278 1338 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 PDS5AQ29RF7 1337 aaKnown RBP9.5□□□□□ -0.89
SNHG1-223ENST00000545440 SALL1Q9NSC2 1324 aa9.5□□□□□ -0.89
SNHG1-223ENST00000545440 RPAP1Q9BWH6 1393 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-223ENST00000545440 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 PRAMEF18Q5VWM3 479 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 ARMC9Q7Z3E5 817 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 DZIP1LQ8IYY4 767 aaKnown RBP9.49□□□□□ -0.89
SNHG1-223ENST00000545440 ANKLE1Q8NAG6 615 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 TEKT1Q969V4 418 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 ZDHHC15Q96MV8 337 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 ZIC5Q96T25 663 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 MRIQ9BWK5 157 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 ALG2Q9H553 416 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 SAGE1Q9NXZ1 904 aa9.49□□□□□ -0.89
SNHG1-223ENST00000545440 PHIPQ8WWQ0 1821 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 UNCXA6NJT0 531 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 RLBP1P12271 317 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 GRIK5Q16478 980 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 SUPT20HL1Q3ZLR7 823 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 SLFNL1Q499Z3 407 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 HHIPL2Q6UWX4 724 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 MOB2Q70IA6 237 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 ZNF70Q9UC06 446 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-223ENST00000545440 DENND2AQ9ULE3 1009 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
SNHG1-223ENST00000545440 MYH1P12882 1939 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 MYH8P13535 1937 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 A0A1B0GUL7 405 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 UBE2Q2LH0YL09 131 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 PPP1R12BO60237 982 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-223ENST00000545440 GPR37L1O60883 481 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
SNHG1-223ENST00000545440 ADORA1P30542 326 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 PHKA1P46020 1223 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 TNNI2P48788 182 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 KIF23Q02241 960 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-223ENST00000545440 RASA3Q14644 834 aa9.47□□□□□ -0.89
SNHG1-223ENST00000545440 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
SNHG1-223ENST00000545440 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms