RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PRR14Q9BWN1 585 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-224ENST00000544990 LRP2BPQ9P2M1 347 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 DAGLAQ9Y4D2 1042 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 THSD7BQ9C0I4 1608 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 AOX1Q06278 1338 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 AKAP11Q9UKA4 1901 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 A6NJR5 290 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 FAM155AB1AL88 458 aaPredicted RBP9□□□□□ -0.97
CPSF7-224ENST00000544990 CA12O43570 354 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 LILRB3O75022 631 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 IGSF3O75054 1194 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 CTCFP49711 727 aaPredicted RBP9□□□□□ -0.97
CPSF7-224ENST00000544990 CACNB3P54284 484 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 MOB2Q70IA6 237 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 SIRT2Q8IXJ6 389 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 SLC10A4Q96EP9 437 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 IL1RAPL2Q9NP60 686 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 USP40Q9NVE5 1235 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 RAI14Q9P0K7 980 aa9□□□□□ -0.97
CPSF7-224ENST00000544990 DBNLQ9UJU6 430 aaKnown RBP9□□□□□ -0.97
CPSF7-224ENST00000544990 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 FOXN1O15353 648 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 USP2O75604 605 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-224ENST00000544990 AP1G2O75843 785 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 IFIT2P09913 472 aaKnown RBP8.99□□□□□ -0.97
CPSF7-224ENST00000544990 KIF23Q02241 960 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-224ENST00000544990 MECOMQ03112 1051 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 LDLRAD1Q5T700 205 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 COL13A1Q5TAT6 717 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-224ENST00000544990 DCAF15Q66K64 600 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 CDC42EP5Q6NZY7 148 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 PI16Q6UXB8 463 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 TBC1D9Q6ZT07 1266 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 ANKRD13AQ8IZ07 590 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 FAM151AQ8WW52 585 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 TEPSINQ96N21 525 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 NOL10Q9BSC4 688 aaKnown RBP8.99□□□□□ -0.97
CPSF7-224ENST00000544990 TMEM39BQ9GZU3 492 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 MROH7-TTC4A0A0A0MT08 1334 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 GAKO14976 1311 aa8.99□□□□□ -0.97
CPSF7-224ENST00000544990 GPR75-ASB3A0A0A6YYF3 556 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 MAP4K4O95819 1239 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-224ENST00000544990 BTDP43251 543 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 ZAP70P43403 619 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 TCP10Q12799 353 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 QPCTQ16769 361 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 NSUN4Q96CB9 384 aaKnown RBP8.98□□□□□ -0.97
CPSF7-224ENST00000544990 LRRCC1Q9C099 1032 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 TLR7Q9NYK1 1049 aaKnown RBP8.98□□□□□ -0.97
CPSF7-224ENST00000544990 FZD1Q9UP38 647 aa8.98□□□□□ -0.97
CPSF7-224ENST00000544990 RPAP1Q9BWH6 1393 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-224ENST00000544990 ENTPD3O75355 529 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 BAG3O95817 575 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 CYP2E1P05181 493 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-224ENST00000544990 LBX1P52954 281 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 PPP4CP60510 307 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 FUT2Q10981 343 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 SREBF2Q12772 1141 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 MTMR2Q13614 643 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 TTF1Q15361 905 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-224ENST00000544990 NAA16Q6N069 864 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-224ENST00000544990 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 ZIC5Q96T25 663 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 IDI2Q9BXS1 227 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 PRDM10Q9NQV6 1147 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 CSADQ9Y600 493 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 SSC5DA1L4H1 1573 aa8.97□□□□□ -0.97
CPSF7-224ENST00000544990 MYO5AQ9Y4I1 1855 aaKnown RBP8.97□□□□□ -0.97
CPSF7-224ENST00000544990 PCNTO95613 3336 aa8.96□□□□□ -0.97
CPSF7-224ENST00000544990 IDH1O75874 414 aaKnown RBP8.96□□□□□ -0.98
CPSF7-224ENST00000544990 ZBTB48P10074 688 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-224ENST00000544990 HSPA8P11142 646 aaKnown RBP8.96□□□□□ -0.98
CPSF7-224ENST00000544990 RGS3P49796 1198 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 INHBEP58166 350 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 MAP3K12Q12852 859 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 NFIAQ12857 509 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 AAMPQ13685 434 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 SPRYD7Q5W111 196 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 TMED8Q6PL24 325 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-224ENST00000544990 ZSCAN29Q8IWY8 852 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-224ENST00000544990 CDAN1Q8IWY9 1227 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.96□□□□□ -0.98
CPSF7-224ENST00000544990 ZNF341Q9BYN7 854 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 DCTPP1Q9H773 170 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 SAGE1Q9NXZ1 904 aa8.96□□□□□ -0.98
CPSF7-224ENST00000544990 MAST2Q6P0Q8 1798 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 MANSC4A6NHS7 340 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-224ENST00000544990 TRPA1O75762 1119 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 TM4SF4P48230 202 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 RHBDL3P58872 404 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 PICALMQ13492 652 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 Q3C1V9 767 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 MIGA2Q7L4E1 593 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 CERS3Q8IU89 383 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms