RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SPOPO43791 374 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 EVCP57679 992 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 REXO1Q8N1G1 1221 aaKnown RBP14.31□□□□□ -0.12
CHD4-211ENST00000544484 TMEM63CQ9P1W3 806 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 SERTAD1Q9UHV2 236 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 DNM3Q9UQ16 869 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 PPP1R2P41236 205 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 MYCT1Q8N699 235 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 FBF1Q8TES7 1133 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 TBC1D22AQ8WUA7 517 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 CHAMP1Q96JM3 812 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 NOP56O00567 594 aaKnown RBP14.3□□□□□ -0.12
CHD4-211ENST00000544484 FGAP02671 866 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 PPP2R3AQ06190 1150 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 IFT74Q96LB3 600 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 BRD1O95696 1058 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 CAPN2P17655 700 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 ADORA1P30542 326 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 TNNC1P63316 161 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 PKP1Q13835 747 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 FRMPD2Q68DX3 1309 aaPredicted RBP14.3□□□□□ -0.12
CHD4-211ENST00000544484 FERP16591 822 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 KIAA0825Q8IV33 1275 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 MSANTD4Q8NCY6 345 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.3□□□□□ -0.124e-6■■□□□ 11.4
CHD4-211ENST00000544484 TLR7Q9NYK1 1049 aaKnown RBP14.3□□□□□ -0.12
CHD4-211ENST00000544484 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 CHRNDQ07001 517 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 PSMB7Q99436 277 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 HAUS7Q99871 368 aa14.3□□□□□ -0.12
CHD4-211ENST00000544484 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■■■■□ 22.6
CHD4-211ENST00000544484 PHKA1P46020 1223 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 USPL1Q5W0Q7 1092 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 ARPP21Q9UBL0 812 aaPredicted RBP14.29□□□□□ -0.12
CHD4-211ENST00000544484 PCCAP05165 728 aaPredicted RBP14.29□□□□□ -0.12
CHD4-211ENST00000544484 ALDH1B1P30837 517 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 NELFBQ8WX92 580 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 SSX2IPQ9Y2D8 614 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
CHD4-211ENST00000544484 GCNT3O95395 438 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 KCNQ4P56696 695 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 MXRA7P84157 204 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 NIM1KQ8IY84 436 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 USP28Q96RU2 1077 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 TSGA10Q9BZW7 698 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 KIF24Q5T7B8 1368 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 FAM182BQ5T319 152 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 CYP26C1Q6V0L0 522 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 KDM5AP29375 1690 aaKnown RBP14.29□□□□□ -0.12
CHD4-211ENST00000544484 U2AF2P26368 475 aaKnown RBP eCLIP14.29□□□□□ -0.122e-8■□□□□ 10.4
CHD4-211ENST00000544484 MTX1Q13505 466 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 SEL1L2Q5TEA6 688 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.29□□□□□ -0.12
CHD4-211ENST00000544484 UNC5CLQ8IV45 518 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 MTUS1Q9ULD2 1270 aa14.29□□□□□ -0.12
CHD4-211ENST00000544484 TNKSO95271 1327 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 STX10O60499 249 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 ZBED4O75132 1171 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 STRN3Q13033 797 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 CALCOCO2Q13137 446 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 ASIC2Q16515 512 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 UTP14CQ5TAP6 766 aaKnown RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 LRRC47Q8N1G4 583 aaKnown RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 RDH13Q8NBN7 331 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 UBLCP1Q8WVY7 318 aaPredicted RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 ZSCAN10Q96SZ4 725 aaPredicted RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 SIK1P57059 783 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 KCNK9Q9NPC2 374 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 ZFYVE16Q7Z3T8 1539 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 EXOC3O60645 756 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 JAKMIP2Q96AA8 810 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 MRPL44Q9H9J2 332 aaKnown RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 TPH2Q8IWU9 490 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 LZTS2Q9BRK4 669 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 MTRF1LQ9UGC7 380 aaKnown RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 NAPGQ99747 312 aaPredicted RBP14.28□□□□□ -0.12
CHD4-211ENST00000544484 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
CHD4-211ENST00000544484 TRPC3Q13507 836 aa14.27□□□□□ -0.12
CHD4-211ENST00000544484 KIFAP3Q92845 792 aa14.27□□□□□ -0.12
CHD4-211ENST00000544484 LRRC45Q96CN5 670 aa14.27□□□□□ -0.12
CHD4-211ENST00000544484 ZNF445P59923 1031 aa14.27□□□□□ -0.12
CHD4-211ENST00000544484 FANCBQ8NB91 859 aa14.27□□□□□ -0.12
CHD4-211ENST00000544484 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.123e-6■□□□□ 10.4
CHD4-211ENST00000544484 ZNF274Q96GC6 653 aaPredicted RBP14.27□□□□□ -0.12
CHD4-211ENST00000544484 NSRP1Q9H0G5 558 aaKnown RBP14.27□□□□□ -0.12
CHD4-211ENST00000544484 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.12
CHD4-211ENST00000544484 NR1I2O75469 434 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 TRIM14Q14142 442 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 CFAP58Q5T655 872 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms