RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 RNF113AO15541 343 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 PRC1O43663 620 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 IPO7O95373 1038 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 HSPD1P10809 573 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 RBL2Q08999 1139 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 LONRF3Q496Y0 759 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 CCNI2Q6ZMN8 369 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 TRAPPC11Q7Z392 1133 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 VPS37DQ86XT2 251 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.63□□□□□ -1.51
LMO3-229ENST00000543721 PYM1Q9BRP8 204 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 NRXN3Q9Y4C0 1643 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 SPEF2Q9C093 1822 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 MEFVO15553 781 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 KRT86O43790 486 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 PBX1P40424 430 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 GNGT1P63211 74 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 MDM2Q00987 491 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 RILPL1Q5EBL4 403 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 PAPD7Q5XG87 772 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 CCDC129Q6ZRS4 1044 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 RIC3Q7Z5B4 369 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 C3orf20Q8ND61 904 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 ACTR5Q9H9F9 607 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 VEZTQ9HBM0 779 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 PAG1Q9NWQ8 432 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 ADD3Q9UEY8 706 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 CAPN7Q9Y6W3 813 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 ZMYM6O95789 1325 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 RICTORQ6R327 1708 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 A0A1B0GUA9 196 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 NDUFAB1O14561 156 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 PPP1R12AO14974 1030 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 HSF2BPO75031 334 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 GPTP24298 496 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 NNTQ13423 1086 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 KRT40Q6A162 431 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 EMBQ6PCB8 327 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 FNBP4Q8N3X1 1017 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 NGDNQ8NEJ9 315 aaKnown RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 MAGEC3Q8TD91 643 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 KAZALD1Q96I82 304 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 IRX2Q9BZI1 471 aaPredicted RBP5.63□□□□□ -1.51
LMO3-229ENST00000543721 KAT14Q9H8E8 782 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 SUGCTQ9HAC7 445 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 STK36Q9NRP7 1315 aa5.63□□□□□ -1.51
LMO3-229ENST00000543721 BMP15O95972 392 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 PTPREP23469 700 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 GGCXP38435 758 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 PDE4BQ07343 736 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 IFFO1Q0D2I5 559 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 MTF1Q14872 753 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 CWF19L2Q2TBE0 894 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 PREPLQ4J6C6 727 aaPredicted RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 WWC2Q6AWC2 1192 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 OTUD7BQ6GQQ9 843 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 ANKRD18AQ8IVF6 992 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 ARFGAP2Q8N6H7 521 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 NOA1Q8NC60 698 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 C1orf131Q8NDD1 294 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 CAGE1Q8TC20 777 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 GSDMAQ96QA5 445 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 MAP3K14Q99558 947 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 SH3GL2Q99962 352 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 SELENOOQ9BVL4 669 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 TBC1D2BQ9UPU7 963 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 ELF1P32519 619 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 SMTNP53814 917 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 TFCP2Q12800 502 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 CRYMQ14894 314 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 C1orf141Q5JVX7 400 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 CDKAL1Q5VV42 579 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 DDX46Q7L014 1031 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 FOXP4Q8IVH2 680 aaPredicted RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 HS6ST3Q8IZP7 471 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 MMGT1Q8N4V1 131 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 SPATA20Q8TB22 786 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 TBC1D22AQ8WUA7 517 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 P3H4Q92791 437 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 KAT2BQ92831 832 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 ZNHIT6Q9NWK9 470 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 EPN1Q9Y6I3 576 aaPredicted RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 LRRC10BA6NIK2 292 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 KIF28PB7ZC32 967 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 PRR29P0C7W0 189 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 EZRP15311 586 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 CASP14P31944 242 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 CYLC1P35663 651 aaPredicted RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 IARSP41252 1262 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 EPHB4P54760 987 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 NLRP6P59044 892 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 FMR1Q06787 632 aaKnown RBP eCLIP5.62□□□□□ -1.51
LMO3-229ENST00000543721 MLECQ14165 292 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 GCKRQ14397 625 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 RABL6Q3YEC7 729 aaPredicted RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 MB21D2Q8IYB1 491 aaPredicted RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 IQCDQ96DY2 449 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 EDC3Q96F86 508 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms