RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 PPP4CP60510 307 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 ERVK-24P63145 666 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
UBC-211ENST00000542416 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
UBC-211ENST00000542416 MFSD14CQ5VZR4 134 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 NAA16Q6N069 864 aaPredicted RBP10.99□□□□□ -0.65
UBC-211ENST00000542416 PLEKHH3Q7Z736 793 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 METTL16Q86W50 562 aaKnown RBP10.99□□□□□ -0.65
UBC-211ENST00000542416 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 ZNF384Q8TF68 577 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 MEIS3Q99687 375 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 APBA2Q99767 749 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 LBHD1Q9BQE6 289 aaPredicted RBP10.99□□□□□ -0.65
UBC-211ENST00000542416 RRP1BQ14684 758 aaKnown RBP10.98□□□□□ -0.65
UBC-211ENST00000542416 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 MORN1Q5T089 497 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 Q7L0L9 218 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 GPR142Q7Z601 462 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 USP6NLQ92738 828 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 TXNRD2Q9NNW7 524 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 RBPJLQ9UBG7 517 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 PRKAG2Q9UGJ0 569 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 PFASO15067 1338 aa10.98□□□□□ -0.65
UBC-211ENST00000542416 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
UBC-211ENST00000542416 IPO8O15397 1037 aaKnown RBP10.97□□□□□ -0.65
UBC-211ENST00000542416 USP14P54578 494 aa10.97□□□□□ -0.65
UBC-211ENST00000542416 MAP2K5Q13163 448 aa10.97□□□□□ -0.65
UBC-211ENST00000542416 LHX8Q68G74 356 aa10.97□□□□□ -0.65
UBC-211ENST00000542416 TRMT2AQ8IZ69 625 aaKnown RBP10.97□□□□□ -0.65
UBC-211ENST00000542416 SH3RF3Q8TEJ3 882 aaPredicted RBP10.97□□□□□ -0.65
UBC-211ENST00000542416 TGFBRAP1Q8WUH2 860 aa10.97□□□□□ -0.65
UBC-211ENST00000542416 EDC3Q96F86 508 aaKnown RBP10.97□□□□□ -0.65
UBC-211ENST00000542416 AATFQ9NY61 560 aaKnown RBP eCLIP10.97□□□□□ -0.659e-7■■□□□ 13.5
UBC-211ENST00000542416 IVNS1ABPQ9Y6Y0 642 aa10.97□□□□□ -0.65
UBC-211ENST00000542416 SLC15A5A6NIM6 579 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L15C9J2P7 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L13C9JLJ4 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L11C9JVI0 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L18D6R9N7 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L22D6RA61 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L17D6RBQ6 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L19D6RCP7 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L20D6RJB6 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 POTEB2H3BUK9 544 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 GNAI2P04899 355 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 MCAMP43121 646 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 USP17L24Q0WX57 530 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 LRRC26Q2I0M4 334 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 Q3C1V9 767 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 TTC39AQ5SRH9 613 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 TMED8Q6PL24 325 aaPredicted RBP10.96□□□□□ -0.65
UBC-211ENST00000542416 PI16Q6UXB8 463 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 C12orf42Q96LP6 360 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 PAGR1Q9BTK6 254 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 ZBTB21Q9ULJ3 1066 aa10.96□□□□□ -0.65
UBC-211ENST00000542416 MGAMO43451 1857 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 DOCK1Q14185 1865 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 FLT1P17948 1338 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 CCND3P30281 292 aaPredicted RBP10.95□□□□□ -0.66
UBC-211ENST00000542416 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
UBC-211ENST00000542416 ATP2B2Q01814 1243 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 MAPKAPK5Q8IW41 473 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBC-211ENST00000542416 LPAR1Q92633 364 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 ZNF512BQ96KM6 892 aaPredicted RBP10.95□□□□□ -0.66
UBC-211ENST00000542416 FEZ1Q99689 392 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 SENP6Q9GZR1 1112 aaPredicted RBP10.95□□□□□ -0.66
UBC-211ENST00000542416 PORCNQ9H237 461 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 PALD1Q9ULE6 856 aa10.95□□□□□ -0.66
UBC-211ENST00000542416 MYH2Q9UKX2 1941 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 DNM1LO00429 736 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 GDF11O95390 407 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 HOXC6P09630 235 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 PTPREP23469 700 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
UBC-211ENST00000542416 CCL14Q16627 93 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 ZNF697Q5TEC3 545 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 LBX2Q6XYB7 198 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 TTC6Q86TZ1 520 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 ARRDC4Q8NCT1 418 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 DNAJC18Q9H819 358 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 CABP5Q9NP86 173 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 DDX20Q9UHI6 824 aaKnown RBP10.94□□□□□ -0.66
UBC-211ENST00000542416 MYH13Q9UKX3 1938 aa10.94□□□□□ -0.66
UBC-211ENST00000542416 STRNO43815 780 aa10.93□□□□□ -0.66
UBC-211ENST00000542416 GH2P01242 217 aa10.93□□□□□ -0.66
UBC-211ENST00000542416 CNGA1P29973 690 aa10.93□□□□□ -0.66
UBC-211ENST00000542416 WDR78Q5VTH9 848 aa10.93□□□□□ -0.66
UBC-211ENST00000542416 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
UBC-211ENST00000542416 COL25A1Q9BXS0 654 aaPredicted RBP10.93□□□□□ -0.66
UBC-211ENST00000542416 KIAA1683Q9H0B3 1180 aa10.93□□□□□ -0.66
UBC-211ENST00000542416 EHD4Q9H223 541 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms