RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 FOXO4P98177 505 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 SH3RF1Q7Z6J0 888 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 MICALL1Q8N3F8 863 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
YBX3-211ENST00000541351 UIMC1Q96RL1 719 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 SLC5A4Q9NY91 659 aa11.9□□□□□ -0.5
YBX3-211ENST00000541351 TCF20Q9UGU0 1960 aaKnown RBP11.89□□□□□ -0.51
YBX3-211ENST00000541351 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 FRMPD3Q5JV73 1810 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 DOCK2Q92608 1830 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 FAM86C2PA6NEL3 165 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 C19orf81C9J6K1 198 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 SEPT4O43236 478 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 HOXC6P09630 235 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 ADCYAP1R1P41586 468 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 KCNQ1P51787 676 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 TFF2Q03403 129 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
YBX3-211ENST00000541351 ADGRE1Q14246 886 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 METTL24Q5JXM2 366 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
YBX3-211ENST00000541351 TOX2Q96NM4 488 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 PAGR1Q9BTK6 254 aa11.89□□□□□ -0.51
YBX3-211ENST00000541351 RLFQ13129 1914 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 LOC285556D6RIA3 1793 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 EPHB4P54760 987 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 BACE1P56817 501 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 RNF180Q86T96 592 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 TMEM199Q8N511 208 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 C11orf16Q9NQ32 467 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 GNL3LQ9NVN8 582 aaKnown RBP11.88□□□□□ -0.51
YBX3-211ENST00000541351 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
YBX3-211ENST00000541351 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 PQBP1O60828 265 aaKnown RBP11.87□□□□□ -0.51
YBX3-211ENST00000541351 TIMP1P01033 207 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 CYBAP13498 195 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
YBX3-211ENST00000541351 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
YBX3-211ENST00000541351 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 MFSD5Q6N075 450 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 CCDC146Q8IYE0 955 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 C8orf58Q8NAV2 365 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 HLA-CQ95604 372 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.512e-23■□□□□ 10.4
YBX3-211ENST00000541351 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 PORCNQ9H237 461 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 TXNRD2Q9NNW7 524 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 RBPJLQ9UBG7 517 aa11.87□□□□□ -0.51
YBX3-211ENST00000541351 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 PDE8BO95263 885 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 ASNSP08243 561 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 SLC5A1P13866 664 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 PTPREP23469 700 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 PBX2P40425 430 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 FLIIQ13045 1269 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 MTMR2Q13614 643 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 LRRC41Q15345 812 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
YBX3-211ENST00000541351 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
YBX3-211ENST00000541351 PPP2R2DQ66LE6 453 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 OLFML2BQ68BL8 750 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 CCDC84Q86UT8 332 aaPredicted RBP11.86□□□□□ -0.51
YBX3-211ENST00000541351 ZFPM1Q8IX07 1006 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 C9orf78Q9NZ63 289 aaPredicted RBP11.86□□□□□ -0.51
YBX3-211ENST00000541351 PHF24Q9UPV7 400 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
YBX3-211ENST00000541351 USP17L10C9JJH3 530 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 APBB1O00213 710 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 TLL1O43897 1013 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
YBX3-211ENST00000541351 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
YBX3-211ENST00000541351 ITGB8P26012 769 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 CYP2C19P33261 490 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 CAP2P40123 477 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 PICALMQ13492 652 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 ANKRD33Q7Z3H0 272 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
YBX3-211ENST00000541351 HERC5Q9UII4 1024 aaKnown RBP11.85□□□□□ -0.51
YBX3-211ENST00000541351 DDTLA6NHG4 134 aaPredicted RBP11.84□□□□□ -0.51
YBX3-211ENST00000541351 GRM8O00222 908 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 STRNO43815 780 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 RARBP10826 455 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 POU3F3P20264 500 aaPredicted RBP11.84□□□□□ -0.51
YBX3-211ENST00000541351 GRB14Q14449 540 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 FBXL18Q96ME1 805 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 NKX2-4Q9H2Z4 354 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 FLRT1Q9NZU1 646 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 NRBP1Q9UHY1 535 aa11.84□□□□□ -0.51
YBX3-211ENST00000541351 SALL1Q9NSC2 1324 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms