RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.644e-7■■■■■ 32.1
TRAPPC1-202ENST00000540486 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 PROCA1Q8NCQ7 364 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 BADQ92934 168 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 SRCIN1Q9C0H9 1055 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 CCND3P30281 292 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 TCP10Q12799 353 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 TMEM31Q5JXX7 168 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 VPS37DQ86XT2 251 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 PPM1EQ8WY54 764 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 CNNM1Q9NRU3 951 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
TRAPPC1-202ENST00000540486 MUC6Q6W4X9 2439 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 TRIM75PA6NK02 468 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 DNM1LO00429 736 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 MSCO60682 206 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 CTNND1O60716 968 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 DNAJB2P25686 324 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 FOXO4P98177 505 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 EPHA10Q5JZY3 1008 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 FBXO33Q7Z6M2 555 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 ARHGAP45Q92619 1136 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 LPAR1Q92633 364 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 MORF4L1Q9UBU8 362 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-202ENST00000540486 GRM8O00222 908 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 GPR37L1O60883 481 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 BMP1P13497 986 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 MAP3K10Q02779 954 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 TAF7LQ5H9L4 462 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 TIFAQ96CG3 184 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 PRDM5Q9NQX1 630 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 UTYO14607 1347 aa11.02□□□□□ -0.65
TRAPPC1-202ENST00000540486 MAPK4P31152 587 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 RGS2P41220 211 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 AAK1Q2M2I8 961 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 CAVIN4Q5BKX8 364 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 CDC42EP5Q6NZY7 148 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 USP6NLQ92738 828 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 EPHX3Q9H6B9 360 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 C9orf78Q9NZ63 289 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 CXXC1Q9P0U4 656 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 FAM198AQ9UFP1 575 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 CHMP3Q9Y3E7 222 aa11.01□□□□□ -0.65
TRAPPC1-202ENST00000540486 TRIM27P14373 513 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 MRE11P49959 708 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 NFIAQ12857 509 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 C1orf53Q5VUE5 145 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 ARRDC4Q8NCT1 418 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 FRAT1Q92837 279 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-202ENST00000540486 SUCLG2Q96I99 432 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 NECAB3Q96P71 396 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-202ENST00000540486 TBC1D2Q9BYX2 928 aa11□□□□□ -0.65
TRAPPC1-202ENST00000540486 ASCC2Q9H1I8 757 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-202ENST00000540486 DDX20Q9UHI6 824 aaKnown RBP11□□□□□ -0.65
TRAPPC1-202ENST00000540486 IQSEC3Q9UPP2 1182 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-202ENST00000540486 MAST2Q6P0Q8 1798 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 SNX17Q15036 470 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 MFSD14CQ5VZR4 134 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 LMBR1LQ6UX01 489 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 YTHDC1Q96MU7 727 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 PDLIM7Q9NR12 457 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 ATRNL1Q5VV63 1379 aa10.99□□□□□ -0.65
TRAPPC1-202ENST00000540486 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 TRIM43BA6NCK2 446 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 ENTPD3O75355 529 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 CCDC85BQ15834 202 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 CCL14Q16627 93 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 MORN1Q5T089 497 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 ZKSCAN2Q63HK3 967 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 CCAR1Q8IX12 1150 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 ZNF280CQ8ND82 737 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 CLUAP1Q96AJ1 413 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 TRIM43Q96BQ3 446 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 APBA2Q99767 749 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms