RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SEC31BQ9NQW1 1179 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 AOX1Q06278 1338 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 RPAP1Q9BWH6 1393 aaPredicted RBP9.89□□□□□ -0.83
DDB1-217ENST00000540166 NTSR2O95665 410 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 ME3Q16798 604 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 LONRF2Q1L5Z9 754 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 CCDC70Q6NSX1 233 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 KIAA0825Q8IV33 1275 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 LSG1Q9H089 658 aaKnown RBP9.89□□□□□ -0.83
DDB1-217ENST00000540166 C10orf71Q711Q0 1435 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 ARMC9Q7Z3E5 817 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 CELF1Q92879 486 aaKnown RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 CRYBG1Q9Y4K1 1723 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 RGPD2P0DJD1 1756 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 PXDNLA1KZ92 1463 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 USP17L3A6NCW0 530 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 USP17L4A6NCW7 530 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 KIF5CO60282 957 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 ZNF157P51786 506 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 UBASH3AP57075 661 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 BRD3Q15059 726 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 SARM1Q6SZW1 724 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 SYNE3Q6ZMZ3 975 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 USP50Q70EL3 339 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 USP17L1Q7RTZ2 530 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 CNPY4Q8N129 248 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 NOC3LQ8WTT2 800 aaKnown RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 XPO4Q9C0E2 1151 aaKnown RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 EPB41L2O43491 1005 aaKnown RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 SLC5A1P13866 664 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 EPS15P42566 896 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 MAP2K1Q02750 393 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 CXCL9Q07325 125 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 NMIQ13287 307 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 OTUD7BQ6GQQ9 843 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 RPAINQ86UA6 219 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 ZSCAN16Q9H4T2 348 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 ZBTB12Q9Y330 459 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 LRP5O75197 1615 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 LIG3P49916 1009 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 LRCH2Q5VUJ6 765 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 ISM2Q6H9L7 571 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 C11orf57Q6ZUT1 292 aaPredicted RBP9.88□□□□□ -0.83
DDB1-217ENST00000540166 FAM227BQ96M60 508 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 PARD6BQ9BYG5 372 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 EPC1Q9H2F5 836 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 JAG2Q9Y219 1238 aa9.88□□□□□ -0.83
DDB1-217ENST00000540166 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 A0A087WUV0 522 aaPredicted RBP9.87□□□□□ -0.83
DDB1-217ENST00000540166 GRM8O00222 908 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 KIF3CO14782 793 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
DDB1-217ENST00000540166 RABGGTAQ92696 567 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 GPR101Q96P66 508 aaPredicted RBP9.87□□□□□ -0.83
DDB1-217ENST00000540166 ABCF2Q9UG63 623 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 PHLPP2Q6ZVD8 1323 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 SLC3A2P08195 630 aaKnown RBP9.87□□□□□ -0.83
DDB1-217ENST00000540166 CHMP4BP1P59074 171 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 CCZ1BP86790 482 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 CCZ1P86791 482 aaPredicted RBP9.87□□□□□ -0.83
DDB1-217ENST00000540166 GUCY1B3Q02153 619 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 MAP9Q49MG5 647 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 LRRC2Q9BYS8 371 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 L2HGDHQ9H9P8 463 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
DDB1-217ENST00000540166 FAN1Q9Y2M0 1017 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 LEMD3Q9Y2U8 911 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 NUP188Q5SRE5 1749 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 PODNQ7Z5L7 613 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 CEP112Q8N8E3 955 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
DDB1-217ENST00000540166 CCDC196A0A1B0GTZ2 297 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 CCDC151A5D8V7 595 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 TNFAIP1Q13829 316 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 TADA2BQ86TJ2 420 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 AFAP1L1Q8TED9 768 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 BRF1Q92994 677 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 VPS33BQ9H267 617 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
DDB1-217ENST00000540166 TPCN1Q9ULQ1 816 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 KIF1CO43896 1103 aaKnown RBP9.86□□□□□ -0.83
DDB1-217ENST00000540166 ALDH1L1O75891 902 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 KCNA3P22001 575 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 HOXA10P31260 410 aaPredicted RBP9.86□□□□□ -0.83
DDB1-217ENST00000540166 KRT32Q14532 448 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 KARSQ15046 597 aaKnown RBP9.86□□□□□ -0.83
DDB1-217ENST00000540166 CNNM3Q8NE01 707 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 PI4K2BQ8TCG2 481 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 PSD3Q9NYI0 1048 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 GOLIM4O00461 696 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 RPS12P25398 132 aaKnown RBP9.86□□□□□ -0.83
DDB1-217ENST00000540166 INPP5BP32019 993 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 GPSM2P81274 684 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 GCKRQ14397 625 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 ARHGEF6Q15052 776 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 SAMD7Q7Z3H4 446 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms