RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 SLURP2P0DP57 97 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 LMNB1P20700 586 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 RASA1P20936 1047 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 METAP2P50579 478 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDH19-203ENST00000540086 NUCB2P80303 420 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 SH3BP5LQ7L8J4 393 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 IQCA1Q86XH1 822 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
CDH19-203ENST00000540086 ZNF444Q8N0Y2 327 aaPredicted RBP8.09□□□□□ -1.11
CDH19-203ENST00000540086 NSUN7Q8NE18 718 aaKnown RBP8.09□□□□□ -1.11
CDH19-203ENST00000540086 DDTLA6NHG4 134 aaPredicted RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 TCP10L2B9ZVM9 353 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 HLA-DOAP06340 250 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 TSPY3P0CV98 308 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 TSPY8P0CW00 308 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 SYT1P21579 422 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 RPS12P25398 132 aaKnown RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 GABPAQ06546 454 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 NBR1Q14596 966 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 IFIT1BQ5T764 474 aaKnown RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 LLPHQ9BRT6 129 aaKnown RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 MTA3Q9BTC8 594 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 VEZTQ9HBM0 779 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 ZNF287Q9HBT7 754 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 MYOZ2Q9NPC6 264 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 TMOD2Q9NZR1 351 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 ZNF70Q9UC06 446 aaPredicted RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 SERPINB13Q9UIV8 391 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 ZNF646O15015 1829 aaPredicted RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 FER1L6Q2WGJ9 1857 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 BAZ2AQ9UIF9 1905 aaKnown RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 FAM196BA6NMK8 535 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 BRD1O95696 1058 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 EGFRP00533 1210 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 CDC27P30260 824 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 ADD1P35611 737 aaKnown RBP8.08□□□□□ -1.12
CDH19-203ENST00000540086 FOSBP53539 338 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 NBPF9Q3BBW0 867 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 SYNE3Q6ZMZ3 975 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 MICALL2Q8IY33 904 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 ZNF654Q8IZM8 581 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 TMTC2Q8N394 836 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 MTMR14Q8NCE2 650 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 SMARCC2Q8TAQ2 1214 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 NUP133Q8WUM0 1156 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 IL17RBQ9NRM6 502 aa8.08□□□□□ -1.12
CDH19-203ENST00000540086 WNT10BO00744 389 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 CPLX1O14810 134 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 STX6O43752 255 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 DHX16O60231 1041 aaKnown RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 ENTPD3O75355 529 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 SHMT1P34896 483 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 ZNF280AP59817 542 aaPredicted RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 PAXIP1Q6ZW49 1069 aaPredicted RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 ZBED3Q96IU2 234 aaPredicted RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 DHX36Q9H2U1 1008 aaKnown RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 FAM217BQ9NTX9 383 aaPredicted RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 RNF181Q9P0P0 153 aa8.07□□□□□ -1.12
CDH19-203ENST00000540086 DDX60LQ5H9U9 1706 aaKnown RBP8.07□□□□□ -1.12
CDH19-203ENST00000540086 NAV1Q8NEY1 1877 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 WDR33Q9C0J8 1336 aaKnown RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 VPS37CA5D8V6 355 aaPredicted RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 AKR1B1P15121 316 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 NT5C2P49902 561 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 RTN1Q16799 776 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 TBC1D10BQ4KMP7 808 aaPredicted RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 SAMD7Q7Z3H4 446 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CATIPQ7Z7H3 387 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CRACR2BQ8N4Y2 399 aaPredicted RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 NEDD1Q8NHV4 660 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 DPF2Q92785 391 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CHMP4CQ96CF2 233 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 EHD4Q9H223 541 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 PI4KBQ9UBF8 816 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 SWAP70Q9UH65 585 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CNOT7Q9UIV1 285 aaKnown RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 SCAF8Q9UPN6 1271 aaKnown RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 CNTNAP1P78357 1384 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 ASTN2O75129 1339 aaPredicted RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 MYO1BO43795 1136 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 ZSCAN22P10073 491 aaPredicted RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 FDPSP14324 419 aaKnown RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 HMGN5P82970 282 aaKnown RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 DGKHQ86XP1 1220 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CDAN1Q8IWY9 1227 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CMTR1Q8N1G2 835 aaKnown RBP8.06□□□□□ -1.12
CDH19-203ENST00000540086 FANCBQ8NB91 859 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 PHKBQ93100 1093 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 CSRNP1Q96S65 589 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms