RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SFRP5Q5T4F7 317 aa9.87□□□□□ -0.83
CCDC7-209ENST00000539197 SLC38A3Q99624 504 aa9.87□□□□□ -0.83
CCDC7-209ENST00000539197 CARS2Q9HA77 564 aaKnown RBP9.87□□□□□ -0.83
CCDC7-209ENST00000539197 SNCAIPQ9Y6H5 919 aa9.87□□□□□ -0.83
CCDC7-209ENST00000539197 LRRC10BA6NIK2 292 aa9.86□□□□□ -0.83
CCDC7-209ENST00000539197 EIF4BP23588 611 aaKnown RBP9.86□□□□□ -0.83
CCDC7-209ENST00000539197 GRK4P32298 578 aa9.86□□□□□ -0.83
CCDC7-209ENST00000539197 CAP2P40123 477 aa9.86□□□□□ -0.83
CCDC7-209ENST00000539197 CCDC85BQ15834 202 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-209ENST00000539197 PRAMEF13Q5VWM6 474 aa9.86□□□□□ -0.83
CCDC7-209ENST00000539197 MFSD2AQ8NA29 543 aa9.86□□□□□ -0.83
CCDC7-209ENST00000539197 FAM53CQ9NYF3 392 aa9.86□□□□□ -0.83
CCDC7-209ENST00000539197 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-209ENST00000539197 H3BS24 57 aa9.85□□□□□ -0.83
CCDC7-209ENST00000539197 AFMP43652 599 aa9.85□□□□□ -0.83
CCDC7-209ENST00000539197 C22orf34Q6ZV56 151 aa9.85□□□□□ -0.83
CCDC7-209ENST00000539197 HID1Q8IV36 788 aa9.85□□□□□ -0.83
CCDC7-209ENST00000539197 MFSD4AQ8N468 514 aa9.85□□□□□ -0.83
CCDC7-209ENST00000539197 DPH2Q9BQC3 489 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-209ENST00000539197 GFRA2O00451 464 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 CBX7O95931 251 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 ZNF865P0CJ78 1059 aaPredicted RBP9.84□□□□□ -0.83
CCDC7-209ENST00000539197 LMNB1P20700 586 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 ZNF746Q6NUN9 644 aaPredicted RBP9.84□□□□□ -0.83
CCDC7-209ENST00000539197 LETMD1Q6P1Q0 360 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 LIN37Q96GY3 246 aaPredicted RBP9.84□□□□□ -0.83
CCDC7-209ENST00000539197 FAM84AQ96KN4 292 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 DUSP9Q99956 384 aaKnown RBP9.84□□□□□ -0.83
CCDC7-209ENST00000539197 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 ST14Q9Y5Y6 855 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 CAPN6Q9Y6Q1 641 aa9.84□□□□□ -0.83
CCDC7-209ENST00000539197 PRPF40AO75400 957 aaKnown RBP9.83□□□□□ -0.84
CCDC7-209ENST00000539197 MESP2Q0VG99 397 aa9.83□□□□□ -0.84
CCDC7-209ENST00000539197 MEI1Q5TIA1 1274 aa9.83□□□□□ -0.84
CCDC7-209ENST00000539197 MLANAQ16655 118 aa9.82□□□□□ -0.84
CCDC7-209ENST00000539197 LCE1DQ5T752 114 aa9.82□□□□□ -0.84
CCDC7-209ENST00000539197 NPAS4Q8IUM7 802 aa9.82□□□□□ -0.84
CCDC7-209ENST00000539197 AK5Q9Y6K8 562 aa9.82□□□□□ -0.84
CCDC7-209ENST00000539197 CST3P01034 146 aaPredicted RBP9.81□□□□□ -0.84
CCDC7-209ENST00000539197 LIG3P49916 1009 aa9.81□□□□□ -0.84
CCDC7-209ENST00000539197 RPS26P62854 115 aaKnown RBP9.81□□□□□ -0.84
CCDC7-209ENST00000539197 CDH24Q86UP0 819 aa9.81□□□□□ -0.84
CCDC7-209ENST00000539197 TJP2Q9UDY2 1190 aa9.81□□□□□ -0.84
CCDC7-209ENST00000539197 WASH4PA8MWX3 477 aa9.8□□□□□ -0.84
CCDC7-209ENST00000539197 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
CCDC7-209ENST00000539197 TLR6Q9Y2C9 796 aa9.8□□□□□ -0.84
CCDC7-209ENST00000539197 ANKRD33BA6NCL7 494 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-209ENST00000539197 CYP7A1P22680 504 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 THAP5Q7Z6K1 395 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 BHLHE22Q8NFJ8 381 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-209ENST00000539197 UBE2FQ969M7 185 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 KIRREL1Q96J84 757 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 COX4I2Q96KJ9 171 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 TACC3Q9Y6A5 838 aa9.79□□□□□ -0.84
CCDC7-209ENST00000539197 GLI1P08151 1106 aa9.78□□□□□ -0.84
CCDC7-209ENST00000539197 TNK2Q07912 1038 aa9.78□□□□□ -0.84
CCDC7-209ENST00000539197 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
CCDC7-209ENST00000539197 F6X3S4 739 aa9.77□□□□□ -0.85
CCDC7-209ENST00000539197 PGRP06401 933 aa9.77□□□□□ -0.85
CCDC7-209ENST00000539197 GDNFP39905 211 aa9.77□□□□□ -0.85
CCDC7-209ENST00000539197 TMEM67Q5HYA8 995 aa9.77□□□□□ -0.85
CCDC7-209ENST00000539197 PRR23BQ6ZRT6 265 aa9.77□□□□□ -0.85
CCDC7-209ENST00000539197 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
CCDC7-209ENST00000539197 CCDC120Q96HB5 630 aa9.77□□□□□ -0.85
CCDC7-209ENST00000539197 KIR3DL1P43629 444 aa9.76□□□□□ -0.85
CCDC7-209ENST00000539197 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-209ENST00000539197 MPZL3Q6UWV2 235 aa9.76□□□□□ -0.85
CCDC7-209ENST00000539197 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
CCDC7-209ENST00000539197 PATL2C9JE40 543 aaKnown RBP9.75□□□□□ -0.85
CCDC7-209ENST00000539197 LCE4AQ5TA78 99 aa9.75□□□□□ -0.85
CCDC7-209ENST00000539197 TMEM87BQ96K49 555 aa9.75□□□□□ -0.85
CCDC7-209ENST00000539197 MIR1-1HGQ9H1L0 117 aa9.75□□□□□ -0.85
CCDC7-209ENST00000539197 KCNK12Q9HB15 430 aa9.75□□□□□ -0.85
CCDC7-209ENST00000539197 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
CCDC7-209ENST00000539197 CORINQ9Y5Q5 1042 aa9.75□□□□□ -0.85
CCDC7-209ENST00000539197 MRPL41Q8IXM3 137 aaKnown RBP9.74□□□□□ -0.85
CCDC7-209ENST00000539197 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
CCDC7-209ENST00000539197 Q96M66 194 aa9.74□□□□□ -0.85
CCDC7-209ENST00000539197 SLAMF8Q9P0V8 285 aa9.74□□□□□ -0.85
CCDC7-209ENST00000539197 UPK3BL1B0FP48 263 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 UPK3BL2E5RIL1 263 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 CTSHP09668 335 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 RAP1GAPP47736 663 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 RALGPS1Q5JS13 557 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 ALPK1Q96QP1 1244 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 PPP1R16BQ96T49 567 aa9.73□□□□□ -0.85
CCDC7-209ENST00000539197 DNAJC25-GNG10A0A024R161 153 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 ESR1P03372 595 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 ETV3P41162 512 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 ERVFC1P60507 584 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 PDE4BQ07343 736 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 SLC6A19Q695T7 634 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 SPOCD1Q6ZMY3 1216 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 CILP2Q8IUL8 1156 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 DNAJB8Q8NHS0 232 aa9.72□□□□□ -0.85
CCDC7-209ENST00000539197 PIWIL2Q8TC59 973 aaKnown RBP9.72□□□□□ -0.85
CCDC7-209ENST00000539197 TSNAXIP1Q2TAA8 658 aa9.71□□□□□ -0.86
CCDC7-209ENST00000539197 FBLN7Q53RD9 439 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms