RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 ERVK-24P63145 666 aa17.41■□□□□ 0.38
PBX3-212ENST00000538998 NOL10Q9BSC4 688 aaKnown RBP17.41■□□□□ 0.38
PBX3-212ENST00000538998 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
PBX3-212ENST00000538998 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 CCND3P30281 292 aaPredicted RBP17.4■□□□□ 0.38
PBX3-212ENST00000538998 MORN1Q5T089 497 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 GPR142Q7Z601 462 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 PLEKHH3Q7Z736 793 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 RBPJLQ9UBG7 517 aa17.4■□□□□ 0.38
PBX3-212ENST00000538998 PEX10O60683 326 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 PLCG2P16885 1265 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
PBX3-212ENST00000538998 CCL14Q16627 93 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 TBC1D9Q6ZT07 1266 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 SH3RF3Q8TEJ3 882 aaPredicted RBP17.39■□□□□ 0.37
PBX3-212ENST00000538998 GUCD1Q96NT3 240 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
PBX3-212ENST00000538998 TRIM34Q9BYJ4 488 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 PORCNQ9H237 461 aa17.39■□□□□ 0.37
PBX3-212ENST00000538998 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
PBX3-212ENST00000538998 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 BAG3O95817 575 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 Q3C1V9 767 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 METTL16Q86W50 562 aaKnown RBP17.38■□□□□ 0.37
PBX3-212ENST00000538998 CRACR2BQ8N4Y2 399 aaPredicted RBP17.38■□□□□ 0.37
PBX3-212ENST00000538998 MEIS3Q99687 375 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 PAGR1Q9BTK6 254 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
PBX3-212ENST00000538998 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 UNC80Q8N2C7 3258 aa17.38■□□□□ 0.37
PBX3-212ENST00000538998 GLRX3O76003 335 aaKnown RBP17.37■□□□□ 0.37
PBX3-212ENST00000538998 SLFN5Q08AF3 891 aa17.37■□□□□ 0.37
PBX3-212ENST00000538998 MAP2K5Q13163 448 aa17.37■□□□□ 0.37
PBX3-212ENST00000538998 MTX1Q13505 466 aa17.37■□□□□ 0.37
PBX3-212ENST00000538998 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
PBX3-212ENST00000538998 DNAJC18Q9H819 358 aa17.37■□□□□ 0.37
PBX3-212ENST00000538998 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
PBX3-212ENST00000538998 MSCO60682 206 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 MCAMP43121 646 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 CCNA1P78396 465 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 JAG1P78504 1218 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 ZNF697Q5TEC3 545 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 MFSD14CQ5VZR4 134 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 SENP6Q9GZR1 1112 aaPredicted RBP17.36■□□□□ 0.37
PBX3-212ENST00000538998 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
PBX3-212ENST00000538998 PRKAG2Q9UGJ0 569 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 ZBTB21Q9ULJ3 1066 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 FLT1P17948 1338 aa17.36■□□□□ 0.37
PBX3-212ENST00000538998 GDF11O95390 407 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 GNAI3P08754 354 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 UQCRFS1P1P0C7P4 283 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
PBX3-212ENST00000538998 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 TGFBRAP1Q8WUH2 860 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 EDC3Q96F86 508 aaKnown RBP17.35■□□□□ 0.37
PBX3-212ENST00000538998 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 RABGAP1Q9Y3P9 1069 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
PBX3-212ENST00000538998 HLA-DOAP06340 250 aa17.34■□□□□ 0.37
PBX3-212ENST00000538998 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
PBX3-212ENST00000538998 PPP4CP60510 307 aa17.34■□□□□ 0.37
PBX3-212ENST00000538998 MAST2Q6P0Q8 1798 aa17.34■□□□□ 0.37
PBX3-212ENST00000538998 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
PBX3-212ENST00000538998 LPAR1Q92633 364 aa17.34■□□□□ 0.37
PBX3-212ENST00000538998 EMILIN3Q9NT22 766 aa17.34■□□□□ 0.37
PBX3-212ENST00000538998 DDX20Q9UHI6 824 aaKnown RBP17.34■□□□□ 0.37
PBX3-212ENST00000538998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.34■□□□□ 0.37
PBX3-212ENST00000538998 SLC15A5A6NIM6 579 aa17.33■□□□□ 0.36
PBX3-212ENST00000538998 DNM1LO00429 736 aa17.33■□□□□ 0.36
PBX3-212ENST00000538998 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
PBX3-212ENST00000538998 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
PBX3-212ENST00000538998 C12orf42Q96LP6 360 aa17.33■□□□□ 0.36
PBX3-212ENST00000538998 PALD1Q9ULE6 856 aa17.33■□□□□ 0.36
PBX3-212ENST00000538998 USP17L15C9J2P7 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L13C9JLJ4 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L11C9JVI0 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L18D6R9N7 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L22D6RA61 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L17D6RBQ6 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L19D6RCP7 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L20D6RJB6 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 IGSF3O75054 1194 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 HOXC6P09630 235 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
PBX3-212ENST00000538998 USP17L24Q0WX57 530 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 FLRT1Q9NZU1 646 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 IVNS1ABPQ9Y6Y0 642 aa17.32■□□□□ 0.36
PBX3-212ENST00000538998 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 CNMDO75829 334 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 PTPREP23469 700 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 CNGA1P29973 690 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 USP14P54578 494 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 RTP1P59025 263 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
PBX3-212ENST00000538998 FEZ1Q99689 392 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms