RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FLT3LGP49771 235 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 BACE1P56817 501 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
DDB1-212ENST00000538470 MTMR2Q13614 643 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 RRP1BQ14684 758 aaKnown RBP10.53□□□□□ -0.72
DDB1-212ENST00000538470 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
DDB1-212ENST00000538470 PANK1Q8TE04 598 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 ASCC2Q9H1I8 757 aaPredicted RBP10.53□□□□□ -0.72
DDB1-212ENST00000538470 EHD4Q9H223 541 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 CHMP4BQ9H444 224 aaKnown RBP10.53□□□□□ -0.72
DDB1-212ENST00000538470 TMOD4Q9NZQ9 345 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 MORF4L1Q9UBU8 362 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 PALD1Q9ULE6 856 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 DDX19BQ9UMR2 479 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 EXOC6BQ9Y2D4 811 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 TRIOBPQ9H2D6 2365 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 INHAP05111 366 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
DDB1-212ENST00000538470 USP5P45974 858 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 DYNLL1P63167 89 aaKnown RBP10.52□□□□□ -0.73
DDB1-212ENST00000538470 HABP4Q5JVS0 413 aaKnown RBP10.52□□□□□ -0.73
DDB1-212ENST00000538470 UBE2Q1Q7Z7E8 422 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 RPAP2Q8IXW5 612 aaPredicted RBP10.52□□□□□ -0.73
DDB1-212ENST00000538470 CLASRPQ8N2M8 674 aaKnown RBP10.52□□□□□ -0.73
DDB1-212ENST00000538470 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 RHPN1Q8TCX5 695 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.52□□□□□ -0.73
DDB1-212ENST00000538470 KIF1BPQ96EK5 621 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 HTATIP2Q9BUP3 242 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 RNF208Q9H0X6 261 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 ALPK3Q96L96 1907 aa10.52□□□□□ -0.73
DDB1-212ENST00000538470 FRMPD3Q5JV73 1810 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 A0A0G2JMZ2 1700 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 GDF11O95390 407 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 HMGCRP04035 888 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 TATDN1Q6P1N9 297 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 TTC6Q86TZ1 520 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 MIGA1Q8NAN2 632 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
DDB1-212ENST00000538470 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 C12orf42Q96LP6 360 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 UNC93B1Q9H1C4 597 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
DDB1-212ENST00000538470 SAP30BPQ9UHR5 308 aaKnown RBP10.51□□□□□ -0.73
DDB1-212ENST00000538470 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 ZNF236Q9UL36 1845 aa10.51□□□□□ -0.73
DDB1-212ENST00000538470 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
DDB1-212ENST00000538470 RAB11FIP3O75154 756 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 FARP2O94887 1054 aaPredicted RBP10.5□□□□□ -0.73
DDB1-212ENST00000538470 ELNP15502 786 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 HERVK_113P62684 666 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 USP17L2Q6R6M4 530 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 ANTXR1Q9H6X2 564 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 SERPINB13Q9UIV8 391 aa10.5□□□□□ -0.73
DDB1-212ENST00000538470 PARP14Q460N5 1801 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 SGPL1O95470 568 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 GH2P01242 217 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 IFIT2P09913 472 aaKnown RBP10.49□□□□□ -0.73
DDB1-212ENST00000538470 MAPK4P31152 587 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 USP14P54578 494 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 JAG1P78504 1218 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
DDB1-212ENST00000538470 PIAS4Q8N2W9 510 aaPredicted RBP10.49□□□□□ -0.73
DDB1-212ENST00000538470 FEZ1Q99689 392 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 RIOK1Q9BRS2 568 aaKnown RBP10.49□□□□□ -0.73
DDB1-212ENST00000538470 CRNKL1Q9BZJ0 848 aaKnown RBP10.49□□□□□ -0.73
DDB1-212ENST00000538470 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.49□□□□□ -0.73
DDB1-212ENST00000538470 ZBTB40Q9NUA8 1239 aa10.49□□□□□ -0.73
DDB1-212ENST00000538470 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 H0YGN5 161 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 PDE6AP16499 860 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 ERVK-24P63145 666 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
DDB1-212ENST00000538470 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 GPRC5AQ8NFJ5 357 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 KIAA1683Q9H0B3 1180 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 CABP5Q9NP86 173 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 GJD2Q9UKL4 321 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 COG6Q9Y2V7 657 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 NDUFB9Q9Y6M9 179 aa10.48□□□□□ -0.73
DDB1-212ENST00000538470 RLFQ13129 1914 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 GOLIM4O00461 696 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 XRCC5P13010 732 aaKnown RBP10.47□□□□□ -0.73
DDB1-212ENST00000538470 SHMT1P34896 483 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 GABPAQ06546 454 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 USP17L24Q0WX57 530 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms