RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HEG1Q9ULI3 1381 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 CALUO43852 315 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 KIAA0754O94854 1291 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 CSPG5O95196 566 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 RPL13P26373 211 aaKnown RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 IGBP1P78318 339 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 MSANTD4Q8NCY6 345 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 NAA15Q9BXJ9 866 aaKnown RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 ZSWIM4Q9H7M6 989 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 RIMBP3CA6NJZ7 1639 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 RIMBP3BA6NNM3 1639 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 RIMBP3Q9UFD9 1639 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 TMEM232C9JQI7 657 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 GCOM1H8Y6P7 765 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 MYZAPP0CAP1 466 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 MAP2K1Q02750 393 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 MIER3Q7Z3K6 550 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 DIS3L2Q8IYB7 885 aaKnown RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 CCPG1Q9ULG6 757 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 EXOC7Q9UPT5 735 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 AATKQ6ZMQ8 1374 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 ERBB4Q15303 1308 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 ARL1P40616 181 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 DYNLL1P63167 89 aaKnown RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 FAM102BQ5T8I3 360 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 GJD4Q96KN9 370 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 A2ML1A8K2U0 1454 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 BBOX1O75936 387 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 POLR2MP0CAP2 368 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 KIAA0753Q2KHM9 967 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 GNPTABQ3T906 1256 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 SUSD4Q5VX71 490 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 CIAPIN1Q6FI81 312 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 DNM3Q9UQ16 869 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 KIF2AO00139 706 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 GAS7O60861 476 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 PDE8BO95263 885 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 GCNT3O95395 438 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 ERCC3P19447 782 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 SPAG1Q07617 926 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 SNW1Q13573 536 aaKnown RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 MAP9Q49MG5 647 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 MASTLQ96GX5 879 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 LRWD1Q9UFC0 647 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 SGSM2O43147 1006 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 SUPT20HL1Q3ZLR7 823 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 RILPL1Q5EBL4 403 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 NLRP10Q86W26 655 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 PLEKHF1Q96S99 279 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 ANO3Q9BYT9 981 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 NACA2Q9H009 215 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 ELP1O95163 1332 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 SEC24BO95487 1268 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 PRR16Q569H4 304 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 SLFN13Q68D06 897 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 FBXO11Q86XK2 927 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 RTKN2Q8IZC4 609 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 ZNF654Q8IZM8 581 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 DSCC1Q9BVC3 393 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 PSTPIP2Q9H939 334 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 MRPL11Q9Y3B7 192 aaKnown RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 CLTCL1P53675 1640 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 USP17L3A6NCW0 530 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 USP17L4A6NCW7 530 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 SLC8A3P57103 927 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 POLA2Q14181 598 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 ANO1Q5XXA6 986 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 TNS3Q68CZ2 1445 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 USP17L1Q7RTZ2 530 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 GPKOWQ92917 476 aaPredicted RBP eCLIP6.01□□□□□ -1.45
LRP6-203ENST00000538239 EAF2Q96CJ1 260 aaPredicted RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 GBP3Q9H0R5 595 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 MRPL44Q9H9J2 332 aaKnown RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 RNF216Q9NWF9 866 aaPredicted RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 PALD1Q9ULE6 856 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 A0A0D9SFI3 127 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 FAM170AA1A519 330 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 POLR2DO15514 142 aaKnown RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 GNG11P61952 73 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 PLCB3Q01970 1234 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 REXO1Q8N1G1 1221 aaKnown RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 PLVAPQ9BX97 442 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 MAK16Q9BXY0 300 aaKnown RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 IKBKGQ9Y6K9 419 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 CNNM4Q6P4Q7 775 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 KCTD1Q719H9 257 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 CABP7Q86V35 215 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 ZNF830Q96NB3 372 aaPredicted RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 HAUS7Q99871 368 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 NBPF3Q9H094 633 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 NEMFO60524 1076 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 UBXN2AP68543 259 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 GRAPQ13588 217 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 TMCO3Q6UWJ1 677 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 OTUD6AQ7L8S5 288 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 MAATS1Q7Z4T9 603 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 NELFCDQ8IXH7 590 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 IL27Q8NEV9 243 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 GRAPLQ8TC17 118 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms