RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 MICU3Q86XE3 530 aa17.71■□□□□ 0.43
PXN-208ENST00000538144 ZSCAN29Q8IWY8 852 aaPredicted RBP17.71■□□□□ 0.43
PXN-208ENST00000538144 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
PXN-208ENST00000538144 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
PXN-208ENST00000538144 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 ZBTB43O43298 467 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 TRAK2O60296 914 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
PXN-208ENST00000538144 CTDNEP1O95476 244 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 GABPAQ06546 454 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
PXN-208ENST00000538144 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
PXN-208ENST00000538144 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 CCDC144CPQ8IYA2 1237 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 DHX36Q9H2U1 1008 aaKnown RBP17.7■□□□□ 0.42
PXN-208ENST00000538144 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 WNT10BO00744 389 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 PPFIA3O75145 1194 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 SLURP2P0DP57 97 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
PXN-208ENST00000538144 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 MICALL2Q8IY33 904 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
PXN-208ENST00000538144 VEZTQ9HBM0 779 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 IL17RBQ9NRM6 502 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 CNOT7Q9UIV1 285 aaKnown RBP17.7■□□□□ 0.42
PXN-208ENST00000538144 ZDHHC9Q9Y397 364 aa17.7■□□□□ 0.42
PXN-208ENST00000538144 SRCAPQ6ZRS2 3230 aa17.69■□□□□ 0.42
PXN-208ENST00000538144 SIPA1L1O43166 1804 aa17.69■□□□□ 0.42
PXN-208ENST00000538144 ENTPD3O75355 529 aa17.69■□□□□ 0.42
PXN-208ENST00000538144 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
PXN-208ENST00000538144 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
PXN-208ENST00000538144 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
PXN-208ENST00000538144 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
PXN-208ENST00000538144 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
PXN-208ENST00000538144 DPF2Q92785 391 aa17.69■□□□□ 0.42
PXN-208ENST00000538144 ZBED3Q96IU2 234 aaPredicted RBP17.69■□□□□ 0.42
PXN-208ENST00000538144 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 MYO1BO43795 1136 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 EGFRP00533 1210 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 ADD1P35611 737 aaKnown RBP17.68■□□□□ 0.42
PXN-208ENST00000538144 NT5C2P49902 561 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 PI4KBQ9UBF8 816 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 PTPDC1A2A3K4 754 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
PXN-208ENST00000538144 SYT1P21579 422 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 CDC27P30260 824 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 SAMD7Q7Z3H4 446 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
PXN-208ENST00000538144 NUP133Q8WUM0 1156 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 RNF181Q9P0P0 153 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 SWAP70Q9UH65 585 aa17.68■□□□□ 0.42
PXN-208ENST00000538144 FSD2A1L4K1 749 aa17.67■□□□□ 0.42
PXN-208ENST00000538144 CPLX1O14810 134 aa17.67■□□□□ 0.42
PXN-208ENST00000538144 MMP14P50281 582 aa17.67■□□□□ 0.42
PXN-208ENST00000538144 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
PXN-208ENST00000538144 RCSD1Q6JBY9 416 aa17.67■□□□□ 0.42
PXN-208ENST00000538144 EHD4Q9H223 541 aa17.67■□□□□ 0.42
PXN-208ENST00000538144 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
PXN-208ENST00000538144 FAM196BA6NMK8 535 aa17.66■□□□□ 0.42
PXN-208ENST00000538144 STX6O43752 255 aa17.66■□□□□ 0.42
PXN-208ENST00000538144 SHMT1P34896 483 aa17.66■□□□□ 0.42
PXN-208ENST00000538144 TBC1D10BQ4KMP7 808 aaPredicted RBP17.66■□□□□ 0.42
PXN-208ENST00000538144 NEDD1Q8NHV4 660 aa17.66■□□□□ 0.42
PXN-208ENST00000538144 FAM217BQ9NTX9 383 aaPredicted RBP17.66■□□□□ 0.42
PXN-208ENST00000538144 BAG4O95429 457 aaKnown RBP17.65■□□□□ 0.42
PXN-208ENST00000538144 BRD1O95696 1058 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 GPR162Q16538 588 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 CATIPQ7Z7H3 387 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 GPC2Q8N158 579 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 FAM151AQ8WW52 585 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 DNAJC18Q9H819 358 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 CNTNAP1P78357 1384 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 ATRNL1Q5VV63 1379 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 AKR1B1P15121 316 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
PXN-208ENST00000538144 CCDC178Q5BJE1 867 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
PXN-208ENST00000538144 CSRNP1Q96S65 589 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
PXN-208ENST00000538144 SCAF8Q9UPN6 1271 aaKnown RBP17.65■□□□□ 0.42
PXN-208ENST00000538144 H7C1D1 291 aa17.64■□□□□ 0.41
PXN-208ENST00000538144 FDPSP14324 419 aaKnown RBP17.64■□□□□ 0.41
PXN-208ENST00000538144 RTN1Q16799 776 aa17.64■□□□□ 0.41
PXN-208ENST00000538144 SKOR2Q2VWA4 1001 aaPredicted RBP17.64■□□□□ 0.41
PXN-208ENST00000538144 C9orf131Q5VYM1 1079 aa17.64■□□□□ 0.41
PXN-208ENST00000538144 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
PXN-208ENST00000538144 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
PXN-208ENST00000538144 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
PXN-208ENST00000538144 VPS37CA5D8V6 355 aaPredicted RBP17.63■□□□□ 0.41
PXN-208ENST00000538144 PDCP20941 246 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 TROAPQ12815 778 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms