RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 FAM173BQ6P4H8 233 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 MROH5Q6ZUA9 1318 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 CNNM4Q6P4Q7 775 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 SDR42E1Q8WUS8 393 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 CCT6BQ92526 530 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 ALAS1P13196 640 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 TPD52P55327 224 aaPredicted RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 CCDC14Q49A88 953 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 TIGD1Q96MW7 591 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 ZEB2O60315 1214 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 BCAMP50895 628 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
LINC00346-201ENST00000538077 TRIM31Q9BZY9 425 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
LINC00346-201ENST00000538077 CCDC160A6NGH7 325 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 DNM2P50570 870 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 GTPBP4Q9BZE4 634 aaKnown RBP12.5□□□□□ -0.41
LINC00346-201ENST00000538077 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
LINC00346-201ENST00000538077 CLRN2A0PK11 232 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 APPBP2Q92624 585 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 VPS18Q9P253 973 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 BMS1Q14692 1282 aaKnown RBP12.5□□□□□ -0.41
LINC00346-201ENST00000538077 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
LINC00346-201ENST00000538077 AKR1B15C9JRZ8 316 aaPredicted RBP12.49□□□□□ -0.41
LINC00346-201ENST00000538077 SF3A3Q12874 501 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00346-201ENST00000538077 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 MAST1Q9Y2H9 1570 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 DNM3Q9UQ16 869 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
LINC00346-201ENST00000538077 PPARAQ07869 468 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 PSMB7Q99436 277 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 LRWD1Q9UFC0 647 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 LIN9Q5TKA1 542 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 CABP7Q86V35 215 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 CSGALNACT2Q8N6G5 542 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 TMEM87BQ96K49 555 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
LINC00346-201ENST00000538077 THRAP3Q9Y2W1 955 aaKnown RBP12.49□□□□□ -0.41
LINC00346-201ENST00000538077 KIF22Q14807 665 aa12.49□□□□□ -0.41
LINC00346-201ENST00000538077 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
LINC00346-201ENST00000538077 CD19P15391 556 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 TBC1D10BQ4KMP7 808 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 USPL1Q5W0Q7 1092 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 MTUS1Q9ULD2 1270 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 HGSO14964 777 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 NONOQ15233 471 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 INF2Q27J81 1249 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 DIS3L2Q8IYB7 885 aaKnown RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 IGSF22Q8N9C0 903 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 TEKT1Q969V4 418 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 BAG1Q99933 345 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 ZHX1Q9UKY1 873 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 RAD50Q92878 1312 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 TNNI1P19237 187 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 ARID4AP29374 1257 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 PTPROQ16827 1216 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 TTLL7Q6ZT98 887 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 MIER3Q7Z3K6 550 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 TAB2Q9NYJ8 693 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 GCC2Q8IWJ2 1684 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 CAVIN2O95810 425 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 UBXN2AP68543 259 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 Q3C1V9 767 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 STMN4Q9H169 189 aaPredicted RBP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00346-201ENST00000538077 EXOC3O60645 756 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 CYP2J2P51589 502 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 SMC6Q96SB8 1091 aa12.48□□□□□ -0.41
LINC00346-201ENST00000538077 OPA1O60313 960 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 HSPA4P34932 840 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 ARFGAP3Q9NP61 516 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 PRR16Q569H4 304 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 TRIM7Q9C029 511 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 PARD3Q8TEW0 1356 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 TCOF1Q13428 1488 aaKnown RBP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 ZWINTO95229 277 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 BTDP43251 543 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 CALCOCO2Q13137 446 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms