RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
SNHG1-206ENST00000537925 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
SNHG1-206ENST00000537925 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
SNHG1-206ENST00000537925 MANSC4A6NHS7 340 aaPredicted RBP13.69□□□□□ -0.22
SNHG1-206ENST00000537925 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 USP17L21D6R901 530 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 CYP2D6P10635 497 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 SDSP20132 328 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 INHBEP58166 350 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 C12orf60Q5U649 245 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 FAM227BQ96M60 508 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
SNHG1-206ENST00000537925 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
SNHG1-206ENST00000537925 LOC285556D6RIA3 1793 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 LAMA4Q16363 1823 aa13.69□□□□□ -0.22
SNHG1-206ENST00000537925 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
SNHG1-206ENST00000537925 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
SNHG1-206ENST00000537925 IRF6O14896 467 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 PTPRAP18433 802 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 SREBF2Q12772 1141 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
SNHG1-206ENST00000537925 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 SBK1Q52WX2 424 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 CTR9Q6PD62 1173 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 CCDC129Q6ZRS4 1044 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 PICK1Q9NRD5 415 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
SNHG1-206ENST00000537925 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
SNHG1-206ENST00000537925 CASP8AP2Q9UKL3 1982 aa13.68□□□□□ -0.22
SNHG1-206ENST00000537925 CYP2D7A0A087X1C5 515 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 HIP1O00291 1037 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 FOXN1O15353 648 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 FOXP2O15409 715 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 SHMT1P34896 483 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 JAG1P78504 1218 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 RABEP1Q15276 862 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 IFNL3Q8IZI9 196 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 KCNH4Q9UQ05 1017 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 SMIM22K7EJ46 135 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
SNHG1-206ENST00000537925 CA12O43570 354 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 RGS19P49795 217 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 GTF2A2P52657 109 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 CASC1Q6TDU7 716 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 AMOTL1Q8IY63 956 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 BEGAINQ9BUH8 593 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.67□□□□□ -0.22
SNHG1-206ENST00000537925 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 AFG3L2Q9Y4W6 797 aa13.67□□□□□ -0.22
SNHG1-206ENST00000537925 MYH4Q9Y623 1939 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNHG1-206ENST00000537925 CXCL11O14625 94 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 APPP05067 770 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 ASNSP08243 561 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
SNHG1-206ENST00000537925 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 PTPN18Q99952 460 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 NACAP1Q9BZK3 213 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 RNF186Q9NXI6 227 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 SAGE1Q9NXZ1 904 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 ZHX2Q9Y6X8 837 aa13.66□□□□□ -0.22
SNHG1-206ENST00000537925 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 CCL15-CCL14A0A0B4J2E2 113 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 FSD2A1L4K1 749 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 GDF11O95390 407 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 TDO2P48775 406 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 CCL15Q16663 113 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
SNHG1-206ENST00000537925 CERKLQ49MI3 558 aaPredicted RBP13.65□□□□□ -0.22
SNHG1-206ENST00000537925 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
SNHG1-206ENST00000537925 C16orf86Q6ZW13 317 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
SNHG1-206ENST00000537925 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 DYNLL2Q96FJ2 89 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
SNHG1-206ENST00000537925 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 TRPA1O75762 1119 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 GH2P01242 217 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 CETPP11597 493 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 CDK8P49336 464 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-206ENST00000537925 MOGSQ13724 837 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 ALX1Q15699 326 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 CFHR5Q9BXR6 569 aa13.64□□□□□ -0.23
SNHG1-206ENST00000537925 NAPBQ9H115 298 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms