RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 PNMA8AQ86V59 439 aaPredicted RBP10.59□□□□□ -0.71
LMO3-216ENST00000537568 NME9Q86XW9 330 aa10.59□□□□□ -0.71
LMO3-216ENST00000537568 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
LMO3-216ENST00000537568 HHIPL1Q96JK4 782 aa10.59□□□□□ -0.71
LMO3-216ENST00000537568 KLF15Q9UIH9 416 aa10.59□□□□□ -0.71
LMO3-216ENST00000537568 CACNA1AO00555 2505 aa10.59□□□□□ -0.71
LMO3-216ENST00000537568 MYH14Q7Z406 1995 aaKnown RBP10.58□□□□□ -0.72
LMO3-216ENST00000537568 FAM13AO94988 1023 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 P4HBP07237 508 aaKnown RBP10.58□□□□□ -0.72
LMO3-216ENST00000537568 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 NBPF6Q5VWK0 638 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 USHBP1Q8N6Y0 703 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 NBPF4Q96M43 638 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 TAOK3Q9H2K8 898 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 ATG3Q9NT62 314 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 SAGE1Q9NXZ1 904 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 MKL2Q9ULH7 1088 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.72
LMO3-216ENST00000537568 MPSTP25325 297 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 ADH6P28332 368 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 FCHSD1Q86WN1 690 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 C2CD5Q86YS7 1000 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 RHPN1Q8TCX5 695 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 DRC1Q96MC2 740 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 RNF186Q9NXI6 227 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
LMO3-216ENST00000537568 CGNL1Q0VF96 1302 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 PCDH11XQ9BZA7 1347 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 PCDH11YQ9BZA8 1340 aa10.57□□□□□ -0.72
LMO3-216ENST00000537568 KIAA0100Q14667 2235 aaKnown RBP10.56□□□□□ -0.72
LMO3-216ENST00000537568 TRPM7Q96QT4 1865 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 HIRAP54198 1017 aaPredicted RBP10.56□□□□□ -0.72
LMO3-216ENST00000537568 PLA2G4EQ3MJ16 856 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 ZNF468Q5VIY5 522 aaPredicted RBP10.56□□□□□ -0.72
LMO3-216ENST00000537568 TMC7Q7Z402 723 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 SREK1Q8WXA9 508 aaKnown RBP10.56□□□□□ -0.72
LMO3-216ENST00000537568 BTBD6Q96KE9 485 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 ANP32EQ9BTT0 268 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 AVENQ9NQS1 362 aaPredicted RBP10.56□□□□□ -0.72
LMO3-216ENST00000537568 PRDM6Q9NQX0 595 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 GPC6Q9Y625 555 aaPredicted RBP10.56□□□□□ -0.72
LMO3-216ENST00000537568 SCN11AQ9UI33 1791 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 MAP3K19Q56UN5 1328 aa10.56□□□□□ -0.72
LMO3-216ENST00000537568 FAM155AB1AL88 458 aaPredicted RBP10.55□□□□□ -0.72
LMO3-216ENST00000537568 ANP32CO43423 234 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 NDUFB5O43674 189 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 TRPA1O75762 1119 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 PCBP4P57723 403 aaKnown RBP10.55□□□□□ -0.72
LMO3-216ENST00000537568 NOGQ13253 232 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 AAMPQ13685 434 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 PRR12Q9ULL5 1215 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 AFDNP55196 1824 aaKnown RBP10.55□□□□□ -0.72
LMO3-216ENST00000537568 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
LMO3-216ENST00000537568 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
LMO3-216ENST00000537568 SBNO2Q9Y2G9 1366 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 PPP1R12BO60237 982 aaPredicted RBP10.54□□□□□ -0.72
LMO3-216ENST00000537568 IGHA1P01876 353 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 ITGB2P05107 769 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 GRIN2CQ14957 1233 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 LINC00114Q6XXX2 140 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.54□□□□□ -0.72
LMO3-216ENST00000537568 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 RBCK1Q9BYM8 510 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 BACH2Q9BYV9 841 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 RAPGEFL1Q9UHV5 662 aa10.54□□□□□ -0.72
LMO3-216ENST00000537568 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
LMO3-216ENST00000537568 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
LMO3-216ENST00000537568 COL8A1P27658 744 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 HOXC9P31274 260 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 DGKGP49619 791 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 NFIXQ14938 502 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 C1orf53Q5VUE5 145 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 HSH2DQ96JZ2 352 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 SAP130Q9H0E3 1048 aa10.53□□□□□ -0.72
LMO3-216ENST00000537568 H0YGN5 161 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 NPR3P17342 541 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 FBLN1P23142 703 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 ERCC5P28715 1186 aaPredicted RBP10.52□□□□□ -0.73
LMO3-216ENST00000537568 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
LMO3-216ENST00000537568 NAALADL2Q58DX5 795 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 AKAP4Q5JQC9 854 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 CHSY3Q70JA7 882 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 SUV39H2Q9H5I1 410 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 MON2Q7Z3U7 1717 aa10.52□□□□□ -0.73
LMO3-216ENST00000537568 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.73
LMO3-216ENST00000537568 ZNF831Q5JPB2 1677 aa10.51□□□□□ -0.73
LMO3-216ENST00000537568 H0YIN7 160 aa10.51□□□□□ -0.73
LMO3-216ENST00000537568 FZD9O00144 591 aa10.51□□□□□ -0.73
LMO3-216ENST00000537568 SFSWAPQ12872 951 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms