RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 OGDHLQ9ULD0 1010 aa9.89□□□□□ -0.83
CHFR-211ENST00000535897 MAST2Q6P0Q8 1798 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 UNC80Q8N2C7 3258 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 USP17L10C9JJH3 530 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 UQCRFS1P1P0C7P4 283 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 XRCC5P13010 732 aaKnown RBP9.88□□□□□ -0.83
CHFR-211ENST00000535897 PLCG2P16885 1265 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 RGS2P41220 211 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 MDM2Q00987 491 aaPredicted RBP9.88□□□□□ -0.83
CHFR-211ENST00000535897 G3BP1Q13283 466 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHFR-211ENST00000535897 MAP3K21Q5TCX8 1036 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 WDR78Q5VTH9 848 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 NAA16Q6N069 864 aaPredicted RBP9.88□□□□□ -0.83
CHFR-211ENST00000535897 TRMT44Q8IYL2 757 aaKnown RBP9.88□□□□□ -0.83
CHFR-211ENST00000535897 TXNRD2Q9NNW7 524 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 STXBP5LQ9Y2K9 1186 aa9.88□□□□□ -0.83
CHFR-211ENST00000535897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
CHFR-211ENST00000535897 PFASO15067 1338 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 SIPA1L1O43166 1804 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 C19orf81C9J6K1 198 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 HLA-DOAP06340 250 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 ARID4AP29374 1257 aaPredicted RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 CCND3P30281 292 aaPredicted RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 HOXA7P31268 230 aaPredicted RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 MCAMP43121 646 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 ERVK-9P63128 1117 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 ERVK-24P63145 666 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 CACNB2Q08289 660 aaPredicted RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 CCL14Q16627 93 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 SHROOM1Q2M3G4 852 aaPredicted RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 TTC39AQ5SRH9 613 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 GPR142Q7Z601 462 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 PLEKHH3Q7Z736 793 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 TGFBRAP1Q8WUH2 860 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 FEZ1Q99689 392 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 APBA2Q99767 749 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 LBHD1Q9BQE6 289 aaPredicted RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 PORCNQ9H237 461 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 MTMR10Q9NXD2 777 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 RBPJLQ9UBG7 517 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 SAP30BPQ9UHR5 308 aaKnown RBP9.87□□□□□ -0.83
CHFR-211ENST00000535897 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 ZBTB21Q9ULJ3 1066 aa9.87□□□□□ -0.83
CHFR-211ENST00000535897 DNAH12Q6ZR08 3092 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 FLT1P17948 1338 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 GNAI2P04899 355 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 CT47B1P0C2W7 299 aaPredicted RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 CNGA1P29973 690 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 JAG1P78504 1218 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 OS9Q13438 667 aaPredicted RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 MTX1Q13505 466 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 ZYXQ15942 572 aaKnown RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 LRRC26Q2I0M4 334 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 ATF7IPQ6VMQ6 1270 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 FOXP4Q8IVH2 680 aaPredicted RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 GTF3C2Q8WUA4 911 aaPredicted RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 CDK5RAP2Q96SN8 1893 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
CHFR-211ENST00000535897 LAMA2P24043 3122 aaKnown RBP9.86□□□□□ -0.83
CHFR-211ENST00000535897 FRMPD3Q5JV73 1810 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 FOCADQ5VW36 1801 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 COL6A1P12109 1028 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 CCNA1P78396 465 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 Q3C1V9 767 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 CCDC158Q5M9N0 1113 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 MFSD14CQ5VZR4 134 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 USP17L2Q6R6M4 530 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 FAM161BQ96MY7 647 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 SENP6Q9GZR1 1112 aaPredicted RBP9.85□□□□□ -0.83
CHFR-211ENST00000535897 DNAJC18Q9H819 358 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 GINM1Q9NU53 330 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 PRKAG2Q9UGJ0 569 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 IVNS1ABPQ9Y6Y0 642 aa9.85□□□□□ -0.83
CHFR-211ENST00000535897 GH2P01242 217 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 ATN1P54259 1190 aaPredicted RBP9.84□□□□□ -0.83
CHFR-211ENST00000535897 PPP4CP60510 307 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 MAP2K5Q13163 448 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 RAB3GAP1Q15042 981 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 MORN1Q5T089 497 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 LHX8Q68G74 356 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 ADGRA1Q86SQ6 560 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 USP6NLQ92738 828 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 FRAT1Q92837 279 aaPredicted RBP9.84□□□□□ -0.83
CHFR-211ENST00000535897 EDC3Q96F86 508 aaKnown RBP9.84□□□□□ -0.83
CHFR-211ENST00000535897 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
CHFR-211ENST00000535897 PNMA6EA0A0J9YXQ4 647 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L15C9J2P7 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L13C9JLJ4 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L11C9JVI0 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L18D6R9N7 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L22D6RA61 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L17D6RBQ6 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L19D6RCP7 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP17L20D6RJB6 530 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 IPO8O15397 1037 aaKnown RBP9.83□□□□□ -0.84
CHFR-211ENST00000535897 MYCNP04198 464 aaPredicted RBP9.83□□□□□ -0.84
CHFR-211ENST00000535897 USP5P45974 858 aa9.83□□□□□ -0.84
CHFR-211ENST00000535897 RARSP54136 660 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms