RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MYBBP1AQ9BQG0 1328 aaKnown RBP10.41□□□□□ -0.74
CLIP1-206ENST00000535290 TBC1D12O60347 775 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 HOXA7P31268 230 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-206ENST00000535290 HERVK_113P62684 666 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 MAP2K5Q13163 448 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 ADGRE1Q14246 886 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 SNX17Q15036 470 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 PUM3Q15397 648 aaKnown RBP10.41□□□□□ -0.74
CLIP1-206ENST00000535290 AKNAD1Q5T1N1 836 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 MFSD14CQ5VZR4 134 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 CCAR1Q8IX12 1150 aaKnown RBP10.41□□□□□ -0.74
CLIP1-206ENST00000535290 TRPV1Q8NER1 839 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 TIFAQ96CG3 184 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 EDC3Q96F86 508 aaKnown RBP10.41□□□□□ -0.74
CLIP1-206ENST00000535290 EPHX3Q9H6B9 360 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLIP1-206ENST00000535290 HCN4Q9Y3Q4 1203 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 DNAH12Q6ZR08 3092 aa10.41□□□□□ -0.74
CLIP1-206ENST00000535290 GAKO14976 1311 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 USP17L5A8MUK1 530 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 MSCO60682 206 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 NBPF7P0C2Y1 421 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 CYP2C19P33261 490 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 ERVK-9P63128 1117 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 ERVK-24P63145 666 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 TLE2Q04725 743 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 MTMR2Q13614 643 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 ALYREFQ86V81 257 aaKnown RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 PAGR1Q9BTK6 254 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 PRDM12Q9H4Q4 367 aa10.4□□□□□ -0.74
CLIP1-206ENST00000535290 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
CLIP1-206ENST00000535290 UTYO14607 1347 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 BMP1P13497 986 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 CAP2P40123 477 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 PBX2P40425 430 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 BACE1P56817 501 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 RABL6Q3YEC7 729 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-206ENST00000535290 ANO1Q5XXA6 986 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 ANKRD44Q8N8A2 993 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 FERMT2Q96AC1 680 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 SNX27Q96L92 541 aa10.39□□□□□ -0.75
CLIP1-206ENST00000535290 DOCK1Q14185 1865 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 GRXCR1A8MXD5 290 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 VAMP4O75379 141 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 ALDH1L1O75891 902 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 IGHA2P01877 340 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 SLC5A1P13866 664 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 JAG1P78504 1218 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 ATP2B2Q01814 1243 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 LPIN2Q92539 896 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 WDR18Q9BV38 432 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 TMOD4Q9NZQ9 345 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
CLIP1-206ENST00000535290 SALL1Q9NSC2 1324 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 CYBAP13498 195 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 IGFBP4P22692 258 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 BTDP43251 543 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 RHBDL3P58872 404 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 TFF2Q03403 129 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 AS3MTQ9HBK9 375 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
CLIP1-206ENST00000535290 SLC15A5A6NIM6 579 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 CNMDO75829 334 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 CLTBP09497 229 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 HOXC6P09630 235 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 RAG1P15918 1043 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 PTPREP23469 700 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 KCNQ1P51787 676 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 FPGSQ05932 587 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 SHROOM1Q2M3G4 852 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-206ENST00000535290 TMEM31Q5JXX7 168 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 WDR78Q5VTH9 848 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-206ENST00000535290 SRCIN1Q9C0H9 1055 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
CLIP1-206ENST00000535290 C11orf16Q9NQ32 467 aa10.36□□□□□ -0.75
CLIP1-206ENST00000535290 CXXC1Q9P0U4 656 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-206ENST00000535290 PHKA1P46020 1223 aa10.35□□□□□ -0.75
CLIP1-206ENST00000535290 LRRC41Q15345 812 aa10.35□□□□□ -0.75
CLIP1-206ENST00000535290 DZIP1Q86YF9 867 aaKnown RBP10.35□□□□□ -0.75
CLIP1-206ENST00000535290 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLIP1-206ENST00000535290 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms