RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 PHIPQ8WWQ0 1821 aa28.83■■■□□ 2.21
SIPA1-210ENST00000534406 PCNTO95613 3336 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 SGSM2O43147 1006 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 ASNSP08243 561 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 PTPRAP18433 802 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 PPARAQ07869 468 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 CERKLQ49MI3 558 aaPredicted RBP28.82■■■□□ 2.2
SIPA1-210ENST00000534406 ZIC5Q96T25 663 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 DSCC1Q9BVC3 393 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 ZBTB21Q9ULJ3 1066 aa28.82■■■□□ 2.2
SIPA1-210ENST00000534406 FGAP02671 866 aa28.81■■■□□ 2.2
SIPA1-210ENST00000534406 CDK8P49336 464 aa28.81■■■□□ 2.2
SIPA1-210ENST00000534406 KIF23Q02241 960 aaPredicted RBP28.81■■■□□ 2.2
SIPA1-210ENST00000534406 CASC1Q6TDU7 716 aa28.81■■■□□ 2.2
SIPA1-210ENST00000534406 JMYQ8N9B5 988 aa28.81■■■□□ 2.2
SIPA1-210ENST00000534406 SLC3A2P08195 630 aaKnown RBP28.8■■■□□ 2.2
SIPA1-210ENST00000534406 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.8■■■□□ 2.2
SIPA1-210ENST00000534406 MANSC4A6NHS7 340 aaPredicted RBP28.79■■■□□ 2.2
SIPA1-210ENST00000534406 GH2P01242 217 aa28.79■■■□□ 2.2
SIPA1-210ENST00000534406 ABCB5Q2M3G0 1257 aa28.79■■■□□ 2.2
SIPA1-210ENST00000534406 REM2Q8IYK8 340 aaPredicted RBP28.79■■■□□ 2.2
SIPA1-210ENST00000534406 ESYT1Q9BSJ8 1104 aa28.79■■■□□ 2.2
SIPA1-210ENST00000534406 ZNF287Q9HBT7 754 aa28.79■■■□□ 2.2
SIPA1-210ENST00000534406 IRF6O14896 467 aa28.78■■■□□ 2.2
SIPA1-210ENST00000534406 SREBF2Q12772 1141 aa28.78■■■□□ 2.2
SIPA1-210ENST00000534406 SHROOM1Q2M3G4 852 aaPredicted RBP28.78■■■□□ 2.2
SIPA1-210ENST00000534406 STK11IPQ8N1F8 1099 aa28.78■■■□□ 2.2
SIPA1-210ENST00000534406 TBC1D2Q9BYX2 928 aa28.78■■■□□ 2.2
SIPA1-210ENST00000534406 CABP5Q9NP86 173 aa28.78■■■□□ 2.2
SIPA1-210ENST00000534406 ZHX2Q9Y6X8 837 aa28.78■■■□□ 2.2
SIPA1-210ENST00000534406 PTPRFP10586 1907 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 USP17L5A8MUK1 530 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 GTF2A2P52657 109 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 JAG1P78504 1218 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 CCDC84Q86UT8 332 aaPredicted RBP28.77■■■□□ 2.2
SIPA1-210ENST00000534406 MKNK2Q9HBH9 465 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 ANAPC4Q9UJX5 808 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 KCNH4Q9UQ05 1017 aa28.77■■■□□ 2.2
SIPA1-210ENST00000534406 PDE4BQ07343 736 aa28.76■■■□□ 2.19
SIPA1-210ENST00000534406 SNAPC2Q13487 334 aa28.76■■■□□ 2.19
SIPA1-210ENST00000534406 CCDC17Q96LX7 622 aa28.76■■■□□ 2.19
SIPA1-210ENST00000534406 CTNNA3Q9UI47 895 aa28.76■■■□□ 2.19
SIPA1-210ENST00000534406 MPHOSPH10O00566 681 aaKnown RBP28.75■■■□□ 2.19
SIPA1-210ENST00000534406 MAP2K1Q02750 393 aaPredicted RBP28.75■■■□□ 2.19
SIPA1-210ENST00000534406 CTDSPL2Q05D32 466 aa28.75■■■□□ 2.19
SIPA1-210ENST00000534406 AS3MTQ9HBK9 375 aa28.75■■■□□ 2.19
SIPA1-210ENST00000534406 AKR1B1P15121 316 aa28.74■■■□□ 2.19
SIPA1-210ENST00000534406 RASA1P20936 1047 aa28.74■■■□□ 2.19
SIPA1-210ENST00000534406 TMEM179Q6ZVK1 233 aa28.74■■■□□ 2.19
SIPA1-210ENST00000534406 MS4A4AQ96JQ5 239 aa28.74■■■□□ 2.19
SIPA1-210ENST00000534406 AFG3L2Q9Y4W6 797 aa28.74■■■□□ 2.19
SIPA1-210ENST00000534406 GREB1LQ9C091 1923 aaPredicted RBP28.73■■■□□ 2.19
SIPA1-210ENST00000534406 TRIM75PA6NK02 468 aa28.73■■■□□ 2.19
SIPA1-210ENST00000534406 CXCL11O14625 94 aa28.73■■■□□ 2.19
SIPA1-210ENST00000534406 HAND2P61296 217 aa28.73■■■□□ 2.19
SIPA1-210ENST00000534406 RAB3GAP1Q15042 981 aa28.73■■■□□ 2.19
SIPA1-210ENST00000534406 KIAA1211Q6ZU35 1233 aa28.73■■■□□ 2.19
SIPA1-210ENST00000534406 CCL15-CCL14A0A0B4J2E2 113 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 PRDM1O75626 825 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 CETPP11597 493 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 INHBEP58166 350 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 PTH1RQ03431 593 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 CCL15Q16663 113 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 ZNF280CQ8ND82 737 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 WDR18Q9BV38 432 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.72■■■□□ 2.19
SIPA1-210ENST00000534406 GTF3C3Q9Y5Q9 886 aa28.72■■■□□ 2.19
SIPA1-210ENST00000534406 TM4SF4P48230 202 aa28.71■■■□□ 2.19
SIPA1-210ENST00000534406 SEPT2Q15019 361 aa28.71■■■□□ 2.19
SIPA1-210ENST00000534406 IMMTQ16891 758 aaKnown RBP28.71■■■□□ 2.19
SIPA1-210ENST00000534406 BRI3BPQ8WY22 251 aa28.71■■■□□ 2.19
SIPA1-210ENST00000534406 U3KPZ7 1027 aaPredicted RBP28.71■■■□□ 2.19
SIPA1-210ENST00000534406 TESPA1A2RU30 521 aaPredicted RBP28.7■■■□□ 2.18
SIPA1-210ENST00000534406 ZNF213O14771 459 aa28.7■■■□□ 2.18
SIPA1-210ENST00000534406 GUCY1A2P33402 732 aa28.7■■■□□ 2.18
SIPA1-210ENST00000534406 SPP2Q13103 211 aa28.7■■■□□ 2.18
SIPA1-210ENST00000534406 ZNF444Q8N0Y2 327 aaPredicted RBP28.7■■■□□ 2.18
SIPA1-210ENST00000534406 BEGAINQ9BUH8 593 aa28.7■■■□□ 2.18
SIPA1-210ENST00000534406 ANO2Q9NQ90 1003 aa28.7■■■□□ 2.18
SIPA1-210ENST00000534406 LOC285556D6RIA3 1793 aa28.7■■■□□ 2.18
SIPA1-210ENST00000534406 A0A0G2JLL6 359 aaPredicted RBP28.69■■■□□ 2.18
SIPA1-210ENST00000534406 PCP11498 1178 aaKnown RBP28.69■■■□□ 2.18
SIPA1-210ENST00000534406 PRRT2Q7Z6L0 340 aaPredicted RBP28.69■■■□□ 2.18
SIPA1-210ENST00000534406 TBC1D10CQ8IV04 446 aa28.69■■■□□ 2.18
SIPA1-210ENST00000534406 NBPF3Q9H094 633 aa28.69■■■□□ 2.18
SIPA1-210ENST00000534406 WBP1LQ9NX94 342 aa28.69■■■□□ 2.18
SIPA1-210ENST00000534406 PLIN4Q96Q06 1357 aa28.69■■■□□ 2.18
SIPA1-210ENST00000534406 ORC4O43929 436 aa28.68■■■□□ 2.18
SIPA1-210ENST00000534406 AKNAD1Q5T1N1 836 aa28.68■■■□□ 2.18
SIPA1-210ENST00000534406 IFNL1Q8IU54 200 aa28.68■■■□□ 2.18
SIPA1-210ENST00000534406 STAG1Q8WVM7 1258 aa28.68■■■□□ 2.18
SIPA1-210ENST00000534406 LSG1Q9H089 658 aaKnown RBP28.68■■■□□ 2.18
SIPA1-210ENST00000534406 RNF41Q9H4P4 317 aaPredicted RBP28.68■■■□□ 2.18
SIPA1-210ENST00000534406 IGF2BP3O00425 579 aaKnown RBP eCLIP28.67■■■□□ 2.18
SIPA1-210ENST00000534406 ICA1Q05084 483 aa28.67■■■□□ 2.18
SIPA1-210ENST00000534406 MTMR2Q13614 643 aa28.67■■■□□ 2.18
SIPA1-210ENST00000534406 MAP4K1Q92918 833 aa28.67■■■□□ 2.18
SIPA1-210ENST00000534406 FEZ1Q99689 392 aa28.67■■■□□ 2.18
SIPA1-210ENST00000534406 TOMM22Q9NS69 142 aa28.67■■■□□ 2.18
SIPA1-210ENST00000534406 FGRP09769 529 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms