RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 SENP6Q9GZR1 1112 aaPredicted RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 PORCNQ9H237 461 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 HERC5Q9UII4 1024 aaKnown RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 AKAP2Q9Y2D5 859 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 ASNSP08243 561 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 CNGA1P29973 690 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
PACS1-214ENST00000533811 Q3C1V9 767 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 PLEKHH3Q7Z736 793 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 SH3RF3Q8TEJ3 882 aaPredicted RBP11.41□□□□□ -0.58
PACS1-214ENST00000533811 NSUN4Q96CB9 384 aaKnown RBP11.41□□□□□ -0.58
PACS1-214ENST00000533811 APBA2Q99767 749 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 WDR18Q9BV38 432 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 COPRSQ9NQ92 184 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 HMG20BQ9P0W2 317 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 PRKAG2Q9UGJ0 569 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
PACS1-214ENST00000533811 USP17L10C9JJH3 530 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
PACS1-214ENST00000533811 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
PACS1-214ENST00000533811 ZYXQ15942 572 aaKnown RBP11.4□□□□□ -0.58
PACS1-214ENST00000533811 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 LHX8Q68G74 356 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 MAPKAPK5Q8IW41 473 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 MEIS3Q99687 375 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 AATFQ9NY61 560 aaKnown RBP eCLIP11.4□□□□□ -0.58
PACS1-214ENST00000533811 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 HDAC5Q9UQL6 1122 aa11.4□□□□□ -0.58
PACS1-214ENST00000533811 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 C19orf81C9J6K1 198 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 E9PSI1 815 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 SRGAP3O43295 1099 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 JAG1P78504 1218 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 MORN1Q5T089 497 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
PACS1-214ENST00000533811 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 USP6NLQ92738 828 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 DHX36Q9H2U1 1008 aaKnown RBP11.39□□□□□ -0.59
PACS1-214ENST00000533811 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
PACS1-214ENST00000533811 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 ATP11BQ9Y2G3 1177 aa11.39□□□□□ -0.59
PACS1-214ENST00000533811 MYO5AQ9Y4I1 1855 aaKnown RBP11.39□□□□□ -0.59
PACS1-214ENST00000533811 LTBP2Q14767 1821 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 FOCADQ5VW36 1801 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 ZBTB22O15209 634 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 BAG3O95817 575 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 MYCNP04198 464 aaPredicted RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 RTP1P59025 263 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 NAA16Q6N069 864 aaPredicted RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 MAFAQ8NHW3 353 aaPredicted RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 GTF3C2Q8WUA4 911 aaPredicted RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 FEZ1Q99689 392 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 PRDM5Q9NQX1 630 aaPredicted RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 NOB1Q9ULX3 412 aaKnown RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.38□□□□□ -0.59
PACS1-214ENST00000533811 MYH1P12882 1939 aa11.38□□□□□ -0.59
PACS1-214ENST00000533811 FLT1P17948 1338 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 GLRX3O76003 335 aaKnown RBP11.37□□□□□ -0.59
PACS1-214ENST00000533811 PLCG2P16885 1265 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 MCAMP43121 646 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 CCNA1P78396 465 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 CDX2Q99626 313 aaPredicted RBP11.37□□□□□ -0.59
PACS1-214ENST00000533811 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
PACS1-214ENST00000533811 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 FLRT1Q9NZU1 646 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
PACS1-214ENST00000533811 PALD1Q9ULE6 856 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 IVNS1ABPQ9Y6Y0 642 aa11.37□□□□□ -0.59
PACS1-214ENST00000533811 GH2P01242 217 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 HLA-DOAP06340 250 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 ARID4AP29374 1257 aaPredicted RBP11.36□□□□□ -0.59
PACS1-214ENST00000533811 CYP2C19P33261 490 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 GJC2Q5T442 439 aaPredicted RBP11.36□□□□□ -0.59
PACS1-214ENST00000533811 ANO1Q5XXA6 986 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
PACS1-214ENST00000533811 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 RABGAP1Q9Y3P9 1069 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 RLFQ13129 1914 aa11.36□□□□□ -0.59
PACS1-214ENST00000533811 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
PACS1-214ENST00000533811 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms