RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 KRT77Q7Z794 578 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 GSDMBQ8TAX9 411 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 MKL1Q969V6 931 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 LUC7L2Q9Y383 392 aaKnown RBP7.82□□□□□ -1.16
BDNF-217ENST00000533131 A2MP01023 1474 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 GPRASP1Q5JY77 1395 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 GNA15P30679 374 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 ZFATQ9P243 1243 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 V9GYY5 206 aaPredicted RBP7.82□□□□□ -1.16
BDNF-217ENST00000533131 ZMYM4Q5VZL5 1548 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 NCAM1P13591 858 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 CHKAP35790 457 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 HSD17B7P56937 341 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 ZC3H12AQ5D1E8 599 aaKnown RBP7.82□□□□□ -1.16
BDNF-217ENST00000533131 FAAH2Q6GMR7 532 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 USP6NLQ92738 828 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 SPAG5Q96R06 1193 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 HERPUD2Q9BSE4 406 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 DNMT1P26358 1616 aaKnown RBP7.82□□□□□ -1.16
BDNF-217ENST00000533131 FAM135AQ9P2D6 1515 aa7.82□□□□□ -1.16
BDNF-217ENST00000533131 SETD1BQ9UPS6 1966 aaKnown RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 TTLL13PA6NNM8 815 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 GPR182O15218 404 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 PMM2O15305 246 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 SLC5A1P13866 664 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 GLULP15104 373 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 KCNJ4P48050 445 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 HYIQ5T013 277 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 KIAA0907Q7Z7F0 614 aaPredicted RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 APOL5Q9BWW9 433 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 RANBP17Q9H2T7 1088 aaKnown RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 TMEM51Q9NW97 253 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 ERBB4Q15303 1308 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 FAM83GA6ND36 823 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 DTNBO60941 627 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 FKBP5Q13451 457 aaPredicted RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 PIN1Q13526 163 aaPredicted RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 ZC3H12BQ5HYM0 836 aaKnown RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 ACAD8Q9UKU7 415 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 KIF16BQ96L93 1317 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 SYNRGQ9UMZ2 1314 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 UHRF1BP1Q6BDS2 1440 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 ITSN2Q9NZM3 1697 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 RASA4O43374 803 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 TPM3P06753 285 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 IFT88Q13099 833 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 TAF1CQ15572 869 aaPredicted RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 CCDC102BQ68D86 513 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 ARL6IP6Q8N6S5 226 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 TSEN2Q8NCE0 465 aaKnown RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 UCMAQ8WVF2 138 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 RTF1Q92541 710 aaKnown RBP7.81□□□□□ -1.16
BDNF-217ENST00000533131 FSD1Q9BTV5 496 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 MAGI2Q86UL8 1455 aa7.81□□□□□ -1.16
BDNF-217ENST00000533131 SSRP1Q08945 709 aaKnown RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 TWISTNBQ3B726 338 aaPredicted RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 NIM1KQ8IY84 436 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 IFNL2Q8IZJ0 200 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ZMAT2Q96NC0 199 aaKnown RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 MAP3K14Q99558 947 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ELAC2Q9BQ52 826 aaKnown RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 CCDC94Q9BW85 323 aaPredicted RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 KDM5CP41229 1560 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 GCC2Q8IWJ2 1684 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ADGRL1O94910 1474 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 TMEM238LA0A1B0GVL6 79 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 RTCAO00442 366 aaKnown RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 CPLX1O14810 134 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ST18O60284 1047 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 SOX5P35711 763 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 MCM2P49736 904 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 MTMR1Q13613 665 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 EML3Q32P44 896 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 PARP10Q53GL7 1025 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ITPRIPL1Q6GPH6 555 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 EP400NLQ6ZTU2 488 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 CCDC91Q7Z6B0 441 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ATCAYQ86WG3 371 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 COG1Q8WTW3 980 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 NELL2Q99435 816 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 DEF6Q9H4E7 631 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 KBTBD4Q9NVX7 518 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 TMCO5BA8MYB1 307 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 MTHFD1P11586 935 aaKnown RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 ABCD1P33897 745 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 USPL1Q5W0Q7 1092 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 CHAMP1Q96JM3 812 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 RTFDC1Q9BY42 306 aaPredicted RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 SRA1Q9HD15 236 aaKnown RBP7.8□□□□□ -1.16
BDNF-217ENST00000533131 TTLL3Q9Y4R7 772 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 PTCH2Q9Y6C5 1203 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 SAMD9LQ8IVG5 1584 aa7.8□□□□□ -1.16
BDNF-217ENST00000533131 FAM170AA1A519 330 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 SMAD7O15105 426 aaKnown RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 NEK4P51957 841 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms