RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ROBO3Q96MS0 1386 aa17.61■□□□□ 0.41
SRPRA-204ENST00000530680 ZNF157P51786 506 aaPredicted RBP17.6■□□□□ 0.41
SRPRA-204ENST00000530680 RGMBQ6NW40 437 aa17.6■□□□□ 0.41
SRPRA-204ENST00000530680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.6■□□□□ 0.41
SRPRA-204ENST00000530680 DYNLL2Q96FJ2 89 aa17.6■□□□□ 0.41
SRPRA-204ENST00000530680 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
SRPRA-204ENST00000530680 SAGE1Q9NXZ1 904 aa17.6■□□□□ 0.41
SRPRA-204ENST00000530680 FOXP2O15409 715 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 GDF11O95390 407 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 CTDSPL2Q05D32 466 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 VGLL4Q14135 290 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 CERKLQ49MI3 558 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-204ENST00000530680 C16orf86Q6ZW13 317 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 ZKSCAN4Q969J2 545 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-204ENST00000530680 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-204ENST00000530680 ELP3Q9H9T3 547 aa17.59■□□□□ 0.41
SRPRA-204ENST00000530680 UNCXA6NJT0 531 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 FAM155AB1AL88 458 aaPredicted RBP17.58■□□□□ 0.4
SRPRA-204ENST00000530680 CTNND1O60716 968 aaKnown RBP17.58■□□□□ 0.4
SRPRA-204ENST00000530680 INPP5BP32019 993 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 CDK8P49336 464 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 PTH1RQ03431 593 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 EVX2Q03828 476 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 RRP12Q5JTH9 1297 aaKnown RBP17.58■□□□□ 0.4
SRPRA-204ENST00000530680 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 SCYL3Q8IZE3 742 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 ZNF444Q8N0Y2 327 aaPredicted RBP17.58■□□□□ 0.4
SRPRA-204ENST00000530680 SLC44A5Q8NCS7 719 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 DNAJC18Q9H819 358 aa17.58■□□□□ 0.4
SRPRA-204ENST00000530680 RBM8AQ9Y5S9 174 aaKnown RBP17.58■□□□□ 0.4
SRPRA-204ENST00000530680 ASNSP08243 561 aa17.57■□□□□ 0.4
SRPRA-204ENST00000530680 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
SRPRA-204ENST00000530680 MCCP23508 829 aa17.57■□□□□ 0.4
SRPRA-204ENST00000530680 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
SRPRA-204ENST00000530680 METTL16Q86W50 562 aaKnown RBP17.57■□□□□ 0.4
SRPRA-204ENST00000530680 CCDC102AQ96A19 550 aa17.57■□□□□ 0.4
SRPRA-204ENST00000530680 LSG1Q9H089 658 aaKnown RBP17.57■□□□□ 0.4
SRPRA-204ENST00000530680 PRDM1O75626 825 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
SRPRA-204ENST00000530680 SHMT1P34896 483 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 CAP2P40123 477 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
SRPRA-204ENST00000530680 MAP3K10Q02779 954 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 GABPAQ06546 454 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 TRDNQ13061 729 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 NOL9Q5SY16 702 aaKnown RBP17.56■□□□□ 0.4
SRPRA-204ENST00000530680 OTUD5Q96G74 571 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 CLMNQ96JQ2 1002 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 CCDC17Q96LX7 622 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 AS3MTQ9HBK9 375 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 ANAPC4Q9UJX5 808 aa17.56■□□□□ 0.4
SRPRA-204ENST00000530680 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
SRPRA-204ENST00000530680 GH2P01242 217 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 AKNAD1Q5T1N1 836 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 LDLRAD1Q5T700 205 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 TATDN1Q6P1N9 297 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.55■□□□□ 0.4
SRPRA-204ENST00000530680 RALYLQ86SE5 291 aaKnown RBP17.55■□□□□ 0.4
SRPRA-204ENST00000530680 MAP4K1Q92918 833 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 OPTNQ96CV9 577 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 GINM1Q9NU53 330 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 ZBTB21Q9ULJ3 1066 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 SNCAIPQ9Y6H5 919 aa17.55■□□□□ 0.4
SRPRA-204ENST00000530680 TSPY2A6NKD2 308 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
SRPRA-204ENST00000530680 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
SRPRA-204ENST00000530680 TMEM179Q6ZVK1 233 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 ERO1BQ86YB8 467 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 STAG1Q8WVM7 1258 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 FEZ1Q99689 392 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
SRPRA-204ENST00000530680 TRPA1O75762 1119 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 SOX10P56693 466 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 RASAL3Q86YV0 1011 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 TBC1D10CQ8IV04 446 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 ESR2Q92731 530 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 WNK4Q96J92 1243 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 KRT23Q9C075 422 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
SRPRA-204ENST00000530680 SPDYE5A6NIY4 337 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 USP17L5A8MUK1 530 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 SLC10A3P09131 477 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 ZBTB48P10074 688 aaPredicted RBP17.52■□□□□ 0.4
SRPRA-204ENST00000530680 AKR1B1P15121 316 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 RASA1P20936 1047 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 PPATQ06203 517 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 CREB3L3Q68CJ9 461 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms