RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 DNAJC18Q9H819 358 aa18.31■□□□□ 0.52
CAPN1-219ENST00000530495 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
CAPN1-219ENST00000530495 MAST2Q6P0Q8 1798 aa18.31■□□□□ 0.52
CAPN1-219ENST00000530495 FLT1P17948 1338 aa18.3■□□□□ 0.52
CAPN1-219ENST00000530495 USP17L10C9JJH3 530 aa18.3■□□□□ 0.52
CAPN1-219ENST00000530495 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-219ENST00000530495 MAPKAPK5Q8IW41 473 aa18.3■□□□□ 0.52
CAPN1-219ENST00000530495 TMEM57Q8N5G2 664 aa18.3■□□□□ 0.52
CAPN1-219ENST00000530495 DIS3LQ8TF46 1054 aaKnown RBP18.3■□□□□ 0.52
CAPN1-219ENST00000530495 STAP2Q9UGK3 403 aa18.3■□□□□ 0.52
CAPN1-219ENST00000530495 PALD1Q9ULE6 856 aa18.3■□□□□ 0.52
CAPN1-219ENST00000530495 XRCC5P13010 732 aaKnown RBP18.29■□□□□ 0.52
CAPN1-219ENST00000530495 TRIM32Q13049 653 aa18.29■□□□□ 0.52
CAPN1-219ENST00000530495 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-219ENST00000530495 GPRC5AQ8NFJ5 357 aa18.29■□□□□ 0.52
CAPN1-219ENST00000530495 TRIB2Q92519 343 aa18.29■□□□□ 0.52
CAPN1-219ENST00000530495 SZT2Q5T011 3432 aa18.29■□□□□ 0.52
CAPN1-219ENST00000530495 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
CAPN1-219ENST00000530495 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-219ENST00000530495 HERVK_113P62684 666 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 MAP3K21Q5TCX8 1036 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 TRIM34Q9BYJ4 488 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 NBPF3Q9H094 633 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 TXNRD2Q9NNW7 524 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
CAPN1-219ENST00000530495 NOP58Q9Y2X3 529 aaKnown RBP18.28■□□□□ 0.52
CAPN1-219ENST00000530495 PEX10O60683 326 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 CYP2B6P20813 491 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 BMP8BP34820 402 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 ZAP70P43403 619 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 OS9Q13438 667 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-219ENST00000530495 SHROOM1Q2M3G4 852 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-219ENST00000530495 NUDT12Q9BQG2 462 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 PIH1D3Q9NQM4 214 aaKnown RBP18.27■□□□□ 0.52
CAPN1-219ENST00000530495 OGDHLQ9ULD0 1010 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 ZBTB21Q9ULJ3 1066 aa18.27■□□□□ 0.52
CAPN1-219ENST00000530495 GDF11O95390 407 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 MAPK4P31152 587 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 Q3C1V9 767 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 TRMT44Q8IYL2 757 aaKnown RBP18.26■□□□□ 0.51
CAPN1-219ENST00000530495 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 USP6NLQ92738 828 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 GDF15Q99988 308 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
CAPN1-219ENST00000530495 SAP30BPQ9UHR5 308 aaKnown RBP18.26■□□□□ 0.51
CAPN1-219ENST00000530495 SOX1O00570 391 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-219ENST00000530495 HLA-DOAP06340 250 aa18.25■□□□□ 0.51
CAPN1-219ENST00000530495 CYP7A1P22680 504 aa18.25■□□□□ 0.51
CAPN1-219ENST00000530495 DYNLL1P63167 89 aaKnown RBP18.25■□□□□ 0.51
CAPN1-219ENST00000530495 USP17L2Q6R6M4 530 aa18.25■□□□□ 0.51
CAPN1-219ENST00000530495 POTEEQ6S8J3 1075 aa18.25■□□□□ 0.51
CAPN1-219ENST00000530495 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-219ENST00000530495 DBNLQ9UJU6 430 aaKnown RBP18.25■□□□□ 0.51
CAPN1-219ENST00000530495 DDX60LQ5H9U9 1706 aaKnown RBP18.25■□□□□ 0.51
CAPN1-219ENST00000530495 MYH1P12882 1939 aa18.25■□□□□ 0.51
CAPN1-219ENST00000530495 PRKAR2AP13861 404 aaKnown RBP18.24■□□□□ 0.51
CAPN1-219ENST00000530495 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
CAPN1-219ENST00000530495 ERVK-24P63145 666 aa18.24■□□□□ 0.51
CAPN1-219ENST00000530495 TATDN1Q6P1N9 297 aa18.24■□□□□ 0.51
CAPN1-219ENST00000530495 CERS3Q8IU89 383 aa18.24■□□□□ 0.51
CAPN1-219ENST00000530495 C7orf61Q8IZ16 206 aa18.24■□□□□ 0.51
CAPN1-219ENST00000530495 C11orf49Q9H6J7 331 aa18.24■□□□□ 0.51
CAPN1-219ENST00000530495 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
CAPN1-219ENST00000530495 MORN1Q5T089 497 aa18.23■□□□□ 0.51
CAPN1-219ENST00000530495 EAF2Q96CJ1 260 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-219ENST00000530495 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-219ENST00000530495 PORCNQ9H237 461 aa18.23■□□□□ 0.51
CAPN1-219ENST00000530495 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
CAPN1-219ENST00000530495 TLR7Q9NYK1 1049 aaKnown RBP18.23■□□□□ 0.51
CAPN1-219ENST00000530495 IDH1O75874 414 aaKnown RBP18.22■□□□□ 0.51
CAPN1-219ENST00000530495 GH2P01242 217 aa18.22■□□□□ 0.51
CAPN1-219ENST00000530495 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-219ENST00000530495 TMED8Q6PL24 325 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-219ENST00000530495 GPR142Q7Z601 462 aa18.22■□□□□ 0.51
CAPN1-219ENST00000530495 PLEKHH3Q7Z736 793 aa18.22■□□□□ 0.51
CAPN1-219ENST00000530495 CCAR1Q8IX12 1150 aaKnown RBP18.22■□□□□ 0.51
CAPN1-219ENST00000530495 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
CAPN1-219ENST00000530495 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
CAPN1-219ENST00000530495 EHD4Q9H223 541 aa18.22■□□□□ 0.51
CAPN1-219ENST00000530495 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-219ENST00000530495 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-219ENST00000530495 RGS2P41220 211 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 USP5P45974 858 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 LHX8Q68G74 356 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 MIGA1Q8NAN2 632 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 SERPINB13Q9UIV8 391 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 RABGAP1Q9Y3P9 1069 aa18.21■□□□□ 0.51
CAPN1-219ENST00000530495 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 COL6A1P12109 1028 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 CCL14Q16627 93 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms