RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
CTNND1-221ENST00000529873 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.89
CTNND1-221ENST00000529873 MYCLP12524 364 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-221ENST00000529873 ZBTB16Q05516 673 aa9.46□□□□□ -0.89
CTNND1-221ENST00000529873 FCHSD1Q86WN1 690 aa9.46□□□□□ -0.89
CTNND1-221ENST00000529873 CEP170Q5SW79 1584 aa9.46□□□□□ -0.89
CTNND1-221ENST00000529873 POLR2DO15514 142 aaKnown RBP9.46□□□□□ -0.89
CTNND1-221ENST00000529873 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.89
CTNND1-221ENST00000529873 TBC1D8BQ0IIM8 1120 aa9.46□□□□□ -0.89
CTNND1-221ENST00000529873 VPS16Q9H269 839 aa9.46□□□□□ -0.89
CTNND1-221ENST00000529873 SPOPO43791 374 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SEC24BO95487 1268 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 CSGALNACT2Q8N6G5 542 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 MLKLQ8NB16 471 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SYNMO15061 1565 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SHROOM2Q13796 1616 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 STK10O94804 968 aaKnown RBP9.46□□□□□ -0.9
CTNND1-221ENST00000529873 ERCC5P28715 1186 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-221ENST00000529873 ALDH1B1P30837 517 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 CTSWP56202 376 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 FANCCQ00597 558 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SETDB1Q15047 1291 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 GBP6Q6ZN66 633 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 CABP7Q86V35 215 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SSH2Q76I76 1423 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 E7EVH7 732 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 BRDTQ58F21 947 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-221ENST00000529873 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SNX29Q8TEQ0 813 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 SECISBP2LQ93073 1101 aaKnown RBP9.46□□□□□ -0.9
CTNND1-221ENST00000529873 NOX5Q96PH1 765 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 TRIM7Q9C029 511 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
CTNND1-221ENST00000529873 DNM3Q9UQ16 869 aa9.46□□□□□ -0.9
CTNND1-221ENST00000529873 NOP56O00567 594 aaKnown RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 RFC1P35251 1148 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 ZAP70P43403 619 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 SH3BGRP55822 239 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 EIF4A1P60842 406 aaKnown RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 PPARAQ07869 468 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 POSTNQ15063 836 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 NELFBQ8WX92 580 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 KDM3AQ9Y4C1 1321 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 CAPN2P17655 700 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 PDE6BP35913 854 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 CETN3O15182 167 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 ZNF75DP51815 510 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 DNAJC21Q5F1R6 531 aaKnown RBP9.45□□□□□ -0.9
CTNND1-221ENST00000529873 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 TGFBRAP1Q8WUH2 860 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 RNF34Q969K3 372 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 HSPA2P54652 639 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 TBC1D22AQ8WUA7 517 aa9.45□□□□□ -0.9
CTNND1-221ENST00000529873 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 E7EWF7 191 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-221ENST00000529873 PSMC4P43686 418 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 USH1GQ495M9 461 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 SYCE1Q8N0S2 351 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 MYCT1Q8N699 235 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 IQCDQ96DY2 449 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 A1BGP04217 495 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 ERO1AQ96HE7 468 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 AZI2Q9H6S1 392 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 NKIRAS1Q9NYS0 192 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 NEO1Q92859 1461 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 EBAG9O00559 213 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 GNA14O95837 355 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 USH1CQ9Y6N9 552 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 PTPRTO14522 1441 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 CRCPO75575 148 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 CIB2O75838 187 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 ZNF202O95125 648 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 ATP5JP18859 108 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 SLC1A4P43007 532 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 C8orf74Q6P047 294 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNND1-221ENST00000529873 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 ZYXQ15942 572 aaKnown RBP9.44□□□□□ -0.9
CTNND1-221ENST00000529873 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
CTNND1-221ENST00000529873 INF2Q27J81 1249 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 KRT40Q6A162 431 aa9.44□□□□□ -0.9
CTNND1-221ENST00000529873 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms