RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 CCNA1P78396 465 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
COPB1-207ENST00000529866 SSH1Q8WYL5 1049 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 USP6NLQ92738 828 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 PAGR1Q9BTK6 254 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 SENP6Q9GZR1 1112 aaPredicted RBP12.87□□□□□ -0.35
COPB1-207ENST00000529866 COPRSQ9NQ92 184 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
COPB1-207ENST00000529866 LAMA2P24043 3122 aaKnown RBP12.86□□□□□ -0.35
COPB1-207ENST00000529866 PLCG2P16885 1265 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 TIMM10P62072 90 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 MAP2K5Q13163 448 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 RRP1BQ14684 758 aaKnown RBP12.86□□□□□ -0.35
COPB1-207ENST00000529866 CCL14Q16627 93 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 MORN1Q5T089 497 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 CRACR2BQ8N4Y2 399 aaPredicted RBP12.86□□□□□ -0.35
COPB1-207ENST00000529866 NSUN4Q96CB9 384 aaKnown RBP12.86□□□□□ -0.35
COPB1-207ENST00000529866 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 CDX2Q99626 313 aaPredicted RBP12.86□□□□□ -0.35
COPB1-207ENST00000529866 PORCNQ9H237 461 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 RBPJLQ9UBG7 517 aa12.86□□□□□ -0.35
COPB1-207ENST00000529866 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
COPB1-207ENST00000529866 PHIPQ8WWQ0 1821 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 DNM1LO00429 736 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 BAG3O95817 575 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
COPB1-207ENST00000529866 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 LPAR1Q92633 364 aa12.85□□□□□ -0.35
COPB1-207ENST00000529866 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
COPB1-207ENST00000529866 EDC3Q96F86 508 aaKnown RBP12.85□□□□□ -0.35
COPB1-207ENST00000529866 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 PEX10O60683 326 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 CNGA1P29973 690 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 RTP1P59025 263 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 Q3C1V9 767 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 SMC4Q9NTJ3 1288 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 HMG20BQ9P0W2 317 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 LRP2BPQ9P2M1 347 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 ZBTB21Q9ULJ3 1066 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 RABGAP1Q9Y3P9 1069 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
COPB1-207ENST00000529866 E9PSI1 815 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 GDF11O95390 407 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 FOSL2P15408 326 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.36
COPB1-207ENST00000529866 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
COPB1-207ENST00000529866 NEUROD6Q96NK8 337 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 FEZ1Q99689 392 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 ATP11BQ9Y2G3 1177 aa12.83□□□□□ -0.36
COPB1-207ENST00000529866 SLC15A5A6NIM6 579 aa12.82□□□□□ -0.36
COPB1-207ENST00000529866 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
COPB1-207ENST00000529866 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
COPB1-207ENST00000529866 TFCP2Q12800 502 aa12.82□□□□□ -0.36
COPB1-207ENST00000529866 PI16Q6UXB8 463 aa12.82□□□□□ -0.36
COPB1-207ENST00000529866 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
COPB1-207ENST00000529866 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
COPB1-207ENST00000529866 CDH23Q9H251 3354 aa12.82□□□□□ -0.36
COPB1-207ENST00000529866 TMEM265A0A087WTH1 108 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 HOXC6P09630 235 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 UQCRFS1P1P0C7P4 283 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP14P54578 494 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
COPB1-207ENST00000529866 METTL16Q86W50 562 aaKnown RBP12.81□□□□□ -0.36
COPB1-207ENST00000529866 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 ARRDC4Q8NCT1 418 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 TGFBRAP1Q8WUH2 860 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
COPB1-207ENST00000529866 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
COPB1-207ENST00000529866 FLT1P17948 1338 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
COPB1-207ENST00000529866 PTPREP23469 700 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 GRB14Q14449 540 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms