RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
CAPN1-212ENST00000527887 SAP30BPQ9UHR5 308 aaKnown RBP17.21■□□□□ 0.35
CAPN1-212ENST00000527887 ZBTB21Q9ULJ3 1066 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 NDUFB9Q9Y6M9 179 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 KIAA0100Q14667 2235 aaKnown RBP17.2■□□□□ 0.34
CAPN1-212ENST00000527887 APBB1O00213 710 aa17.2■□□□□ 0.34
CAPN1-212ENST00000527887 PDE6AP16499 860 aa17.2■□□□□ 0.34
CAPN1-212ENST00000527887 ATP5JP18859 108 aa17.2■□□□□ 0.34
CAPN1-212ENST00000527887 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
CAPN1-212ENST00000527887 ASCC2Q9H1I8 757 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-212ENST00000527887 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
CAPN1-212ENST00000527887 BRCA2P51587 3418 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 GOLIM4O00461 696 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 FLT3LGP49771 235 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 IRX3P78415 501 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-212ENST00000527887 MTMR2Q13614 643 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 GTF3C2Q8WUA4 911 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-212ENST00000527887 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
CAPN1-212ENST00000527887 BIN2Q9UBW5 565 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-212ENST00000527887 ADCY3O60266 1144 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-212ENST00000527887 GDF11O95390 407 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 GJB1P08034 283 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 CERKLQ49MI3 558 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-212ENST00000527887 USP17L2Q6R6M4 530 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
CAPN1-212ENST00000527887 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.343e-15■■■■□ 20.1
CAPN1-212ENST00000527887 CABP5Q9NP86 173 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 GABRQQ9UN88 632 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
CAPN1-212ENST00000527887 RBBP6Q7Z6E9 1792 aaKnown RBP17.17■□□□□ 0.34
CAPN1-212ENST00000527887 PHIPQ8WWQ0 1821 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 TCRBV5S4A2TA0A5A2 114 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 SLC34A2O95436 690 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 GH2P01242 217 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 POLR3DP05423 398 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-212ENST00000527887 GJA8P48165 433 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 USP14P54578 494 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 JAG1P78504 1218 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 HAUS7Q99871 368 aa17.17■□□□□ 0.34
CAPN1-212ENST00000527887 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-212ENST00000527887 CCL5P13501 91 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 MTFR1Q15390 333 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 C12orf42Q96LP6 360 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 RNF208Q9H0X6 261 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 ATP8A2Q9NTI2 1148 aa17.16■□□□□ 0.34
CAPN1-212ENST00000527887 ADD2P35612 726 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 PLCD1P51178 756 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 GABPAQ06546 454 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 ABCB5Q2M3G0 1257 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 P2RX7Q99572 595 aaKnown RBP17.15■□□□□ 0.34
CAPN1-212ENST00000527887 KIAA1683Q9H0B3 1180 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
CAPN1-212ENST00000527887 PTPRFP10586 1907 aa17.14■□□□□ 0.33
CAPN1-212ENST00000527887 HERVK_113P62684 666 aa17.14■□□□□ 0.33
CAPN1-212ENST00000527887 UBE3CQ15386 1083 aa17.14■□□□□ 0.33
CAPN1-212ENST00000527887 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-212ENST00000527887 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
CAPN1-212ENST00000527887 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
CAPN1-212ENST00000527887 LOC285556D6RIA3 1793 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 FOCADQ5VW36 1801 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 SHMT1P34896 483 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 RAB3GAP1Q15042 981 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 FEZ1Q99689 392 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 GJD2Q9UKL4 321 aa17.13■□□□□ 0.33
CAPN1-212ENST00000527887 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 SGPL1O95470 568 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 INHAP05111 366 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 MAPK4P31152 587 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 SHROOM1Q2M3G4 852 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-212ENST00000527887 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
CAPN1-212ENST00000527887 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 GPATCH3Q96I76 525 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
CAPN1-212ENST00000527887 XRCC5P13010 732 aaKnown RBP17.11■□□□□ 0.33
CAPN1-212ENST00000527887 ELNP15502 786 aa17.11■□□□□ 0.33
CAPN1-212ENST00000527887 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
CAPN1-212ENST00000527887 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms