RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 TRPV1Q8NER1 839 aa9.08□□□□□ -0.96
VPS26B-204ENST00000527586 ARNTL2Q8WYA1 636 aa9.08□□□□□ -0.96
VPS26B-204ENST00000527586 UPF3BQ9BZI7 483 aaKnown RBP9.08□□□□□ -0.96
VPS26B-204ENST00000527586 DACH1Q9UI36 760 aa9.08□□□□□ -0.96
VPS26B-204ENST00000527586 MUTYHQ9UIF7 546 aa9.08□□□□□ -0.96
VPS26B-204ENST00000527586 DMDP11532 3685 aa9.08□□□□□ -0.96
VPS26B-204ENST00000527586 MAPK4P31152 587 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 ZP2Q05996 745 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 GRB10Q13322 594 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 LRRC41Q15345 812 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 AMER1Q5JTC6 1135 aaPredicted RBP9.07□□□□□ -0.96
VPS26B-204ENST00000527586 FKBP1CQ5VVH2 108 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 ZNF804AQ7Z570 1209 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 TMEM199Q8N511 208 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 EDC3Q96F86 508 aaKnown RBP9.07□□□□□ -0.96
VPS26B-204ENST00000527586 ASCC2Q9H1I8 757 aaPredicted RBP9.07□□□□□ -0.96
VPS26B-204ENST00000527586 SH2B1Q9NRF2 756 aaPredicted RBP9.07□□□□□ -0.96
VPS26B-204ENST00000527586 FRMPD3Q5JV73 1810 aa9.07□□□□□ -0.96
VPS26B-204ENST00000527586 ZNF536O15090 1300 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 PLXNA3P51805 1871 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 TECTAO75443 2155 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 C19orf67A6NJJ6 358 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 DCDC2CA8MYV0 355 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 FGBP02675 491 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 CYP2C19P33261 490 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 IGHMBP2P38935 993 aaKnown RBP9.06□□□□□ -0.96
VPS26B-204ENST00000527586 NBL1P41271 181 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 ATP2B2Q01814 1243 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 MAP2K5Q13163 448 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 PUM1Q14671 1186 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS26B-204ENST00000527586 HERC4Q5GLZ8 1057 aaPredicted RBP9.06□□□□□ -0.96
VPS26B-204ENST00000527586 GPR142Q7Z601 462 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 PLEKHH3Q7Z736 793 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 CCAR1Q8IX12 1150 aaKnown RBP9.06□□□□□ -0.96
VPS26B-204ENST00000527586 FBXL6Q8N531 539 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 GPRC5AQ8NFJ5 357 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 EDAQ92838 391 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 GREM2Q9H772 168 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 SPINK5Q9NQ38 1064 aaPredicted RBP9.06□□□□□ -0.96
VPS26B-204ENST00000527586 DBF4Q9UBU7 674 aaPredicted RBP9.06□□□□□ -0.96
VPS26B-204ENST00000527586 PHF24Q9UPV7 400 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 KNSTRNQ9Y448 316 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 TRIOO75962 3097 aa9.06□□□□□ -0.96
VPS26B-204ENST00000527586 PCCAP05165 728 aaPredicted RBP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 CA3P07451 260 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 DSG3P32926 999 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 IRS1P35568 1242 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 VCPP55072 806 aaKnown RBP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 CTSWP56202 376 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 PABPC4Q13310 644 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 PUS10Q3MIT2 529 aaKnown RBP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 TRIM67Q6ZTA4 783 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 C15orf52Q6ZUT6 534 aaKnown RBP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 OTOP2Q7RTS6 562 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 ANKRD33Q7Z3H0 272 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 PROCA1Q8NCQ7 364 aaPredicted RBP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 FAM151AQ8WW52 585 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 NKD2Q969F2 451 aaPredicted RBP9.05□□□□□ -0.96
VPS26B-204ENST00000527586 TOX2Q96NM4 488 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 TBX21Q9UL17 535 aa9.05□□□□□ -0.96
VPS26B-204ENST00000527586 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 KDM4AO75164 1064 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 CYBAP13498 195 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 TMEM67Q5HYA8 995 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 CCDC84Q86UT8 332 aaPredicted RBP9.04□□□□□ -0.96
VPS26B-204ENST00000527586 TTLL11Q8NHH1 800 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 PORCNQ9H237 461 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS26B-204ENST00000527586 CWC22Q9HCG8 908 aaKnown RBP9.04□□□□□ -0.96
VPS26B-204ENST00000527586 TXNRD2Q9NNW7 524 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 IL23AQ9NPF7 189 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.04□□□□□ -0.96
VPS26B-204ENST00000527586 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
VPS26B-204ENST00000527586 LPXNO60711 386 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 TAF5LO75529 589 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 AVPR2P30518 371 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 CHRNDQ07001 517 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 TCP10Q12799 353 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 GRIK5Q16478 980 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 Q3C1V9 767 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 ADHFE1Q8IWW8 467 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 TEKT1Q969V4 418 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 CHAMP1Q96JM3 812 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 PRKAG3Q9UGI9 489 aa9.03□□□□□ -0.96
VPS26B-204ENST00000527586 A0A1W2PQ45 241 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-204ENST00000527586 A0A1W2PQY0 241 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 ATP2A2P16615 1042 aaKnown RBP9.02□□□□□ -0.97
VPS26B-204ENST00000527586 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-204ENST00000527586 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
VPS26B-204ENST00000527586 APOBEC3HQ6NTF7 200 aaKnown RBP9.02□□□□□ -0.97
VPS26B-204ENST00000527586 FRMD5Q7Z6J6 570 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 RNF135Q8IUD6 432 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 ZDHHC15Q96MV8 337 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 PPP1R12CQ9BZL4 782 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 NDUFB9Q9Y6M9 179 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
VPS26B-204ENST00000527586 SPTBN2O15020 2390 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms