RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CDC45O75419 566 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 GDF11O95390 407 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 ASNSP08243 561 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-202ENST00000526280 PPARAQ07869 468 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
SMPD1-202ENST00000526280 PPIL2Q13356 520 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 SHROOM1Q2M3G4 852 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-202ENST00000526280 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 ZHX2Q9Y6X8 837 aa15.41■□□□□ 0.06
SMPD1-202ENST00000526280 DOCK1Q14185 1865 aa15.4■□□□□ 0.06
SMPD1-202ENST00000526280 PCNTO95613 3336 aa15.4■□□□□ 0.06
SMPD1-202ENST00000526280 IRF6O14896 467 aa15.4■□□□□ 0.06
SMPD1-202ENST00000526280 HSPA1AP0DMV8 641 aaKnown RBP15.4■□□□□ 0.06
SMPD1-202ENST00000526280 HSPA1BP0DMV9 641 aaKnown RBP15.4■□□□□ 0.06
SMPD1-202ENST00000526280 ESYT1Q9BSJ8 1104 aa15.4■□□□□ 0.06
SMPD1-202ENST00000526280 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-202ENST00000526280 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
SMPD1-202ENST00000526280 ZBTB21Q9ULJ3 1066 aa15.4■□□□□ 0.06
SMPD1-202ENST00000526280 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 USP17L5A8MUK1 530 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 GH2P01242 217 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 SLC3A2P08195 630 aaKnown RBP15.39■□□□□ 0.05
SMPD1-202ENST00000526280 PTH1RQ03431 593 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 ABCB5Q2M3G0 1257 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
SMPD1-202ENST00000526280 STK11IPQ8N1F8 1099 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 AFG3L2Q9Y4W6 797 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 LAMB1P07942 1786 aa15.39■□□□□ 0.05
SMPD1-202ENST00000526280 ATAD5Q96QE3 1844 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 MANSC4A6NHS7 340 aaPredicted RBP15.38■□□□□ 0.05
SMPD1-202ENST00000526280 CXCL11O14625 94 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 TM4SF4P48230 202 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 GTF2A2P52657 109 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 PDE4BQ07343 736 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
SMPD1-202ENST00000526280 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 ZNF287Q9HBT7 754 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 CABP5Q9NP86 173 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 CTNNA3Q9UI47 895 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 KCNH4Q9UQ05 1017 aa15.38■□□□□ 0.05
SMPD1-202ENST00000526280 PHIPQ8WWQ0 1821 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
SMPD1-202ENST00000526280 FGRP09769 529 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 AKR1B1P15121 316 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 RASA1P20936 1047 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 GUCY1A2P33402 732 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 INHBEP58166 350 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 SNAPC2Q13487 334 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 ZNF280CQ8ND82 737 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 WDR18Q9BV38 432 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 MYH8P13535 1937 aa15.37■□□□□ 0.05
SMPD1-202ENST00000526280 MPHOSPH10O00566 681 aaKnown RBP15.36■□□□□ 0.05
SMPD1-202ENST00000526280 ZNF213O14771 459 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 PRDM1O75626 825 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 HAND2P61296 217 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-202ENST00000526280 SREBF2Q12772 1141 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 SEPT2Q15019 361 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 RAB3GAP1Q15042 981 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 TMEM179Q6ZVK1 233 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 ZNF444Q8N0Y2 327 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-202ENST00000526280 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 LSG1Q9H089 658 aaKnown RBP15.36■□□□□ 0.05
SMPD1-202ENST00000526280 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 AS3MTQ9HBK9 375 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMPD1-202ENST00000526280 TACC3Q9Y6A5 838 aa15.36■□□□□ 0.05
SMPD1-202ENST00000526280 TRIM75PA6NK02 468 aa15.35■□□□□ 0.05
SMPD1-202ENST00000526280 CETPP11597 493 aa15.35■□□□□ 0.05
SMPD1-202ENST00000526280 SPP2Q13103 211 aa15.35■□□□□ 0.05
SMPD1-202ENST00000526280 IMMTQ16891 758 aaKnown RBP15.35■□□□□ 0.05
SMPD1-202ENST00000526280 BRI3BPQ8WY22 251 aa15.35■□□□□ 0.05
SMPD1-202ENST00000526280 WBP1LQ9NX94 342 aa15.35■□□□□ 0.05
SMPD1-202ENST00000526280 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-202ENST00000526280 CCL15-CCL14A0A0B4J2E2 113 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 A0A0G2JLL6 359 aaPredicted RBP15.34■□□□□ 0.05
SMPD1-202ENST00000526280 ORC4O43929 436 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 PCP11498 1178 aaKnown RBP15.34■□□□□ 0.05
SMPD1-202ENST00000526280 CCL15Q16663 113 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 AKNAD1Q5T1N1 836 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 PRRT2Q7Z6L0 340 aaPredicted RBP15.34■□□□□ 0.05
SMPD1-202ENST00000526280 IFNL1Q8IU54 200 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 TBC1D10CQ8IV04 446 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 STAG1Q8WVM7 1258 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 PTPN18Q99952 460 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMPD1-202ENST00000526280 ANO2Q9NQ90 1003 aa15.34■□□□□ 0.05
SMPD1-202ENST00000526280 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
SMPD1-202ENST00000526280 BACE1P56817 501 aa15.33■□□□□ 0.04
SMPD1-202ENST00000526280 MOGSQ13724 837 aa15.33■□□□□ 0.04
SMPD1-202ENST00000526280 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
SMPD1-202ENST00000526280 SIAH1Q8IUQ4 282 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms