RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
CCS-203ENST00000526058 PARK7Q99497 189 aaKnown RBP20.52■□□□□ 0.88
CCS-203ENST00000526058 ARHGAP39Q9C0H5 1083 aa20.52■□□□□ 0.88
CCS-203ENST00000526058 ZBTB21Q9ULJ3 1066 aa20.52■□□□□ 0.88
CCS-203ENST00000526058 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.87
CCS-203ENST00000526058 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 CYP2D6P10635 497 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 HMGCS2P54868 508 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 LACTBP83111 547 aaPredicted RBP20.51■□□□□ 0.87
CCS-203ENST00000526058 AAMPQ13685 434 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 WDR18Q9BV38 432 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 TBC1D2Q9BYX2 928 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 AS3MTQ9HBK9 375 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 PTPN22Q9Y2R2 807 aa20.51■□□□□ 0.87
CCS-203ENST00000526058 GH2P01242 217 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 MX1P20591 662 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 SHMT1P34896 483 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 GINM1Q9NU53 330 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 AGTPBP1Q9UPW5 1226 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 SLC45A1Q9Y2W3 748 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
CCS-203ENST00000526058 ERC2O15083 957 aa20.49■□□□□ 0.87
CCS-203ENST00000526058 CTGFP29279 349 aa20.49■□□□□ 0.87
CCS-203ENST00000526058 GABPAQ06546 454 aa20.49■□□□□ 0.87
CCS-203ENST00000526058 MTMR2Q13614 643 aa20.49■□□□□ 0.87
CCS-203ENST00000526058 SH3D19Q5HYK7 790 aa20.49■□□□□ 0.87
CCS-203ENST00000526058 PROCA1Q8NCQ7 364 aaPredicted RBP20.49■□□□□ 0.87
CCS-203ENST00000526058 ATP8A2Q9NTI2 1148 aa20.49■□□□□ 0.87
CCS-203ENST00000526058 RNF113AO15541 343 aaKnown RBP20.48■□□□□ 0.87
CCS-203ENST00000526058 BCRP11274 1271 aa20.48■□□□□ 0.87
CCS-203ENST00000526058 BACE1P56817 501 aa20.48■□□□□ 0.87
CCS-203ENST00000526058 KIF22Q14807 665 aa20.48■□□□□ 0.87
CCS-203ENST00000526058 CERKLQ49MI3 558 aaPredicted RBP20.48■□□□□ 0.87
CCS-203ENST00000526058 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
CCS-203ENST00000526058 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
CCS-203ENST00000526058 CYP2D7A0A087X1C5 515 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 SMIM22K7EJ46 135 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
CCS-203ENST00000526058 SOX10P56693 466 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 ARHGEF6Q15052 776 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 OSBP2Q969R2 916 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 DYNLL2Q96FJ2 89 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 MYH8P13535 1937 aa20.47■□□□□ 0.87
CCS-203ENST00000526058 MGAMO43451 1857 aa20.46■□□□□ 0.87
CCS-203ENST00000526058 USP17L10C9JJH3 530 aa20.46■□□□□ 0.87
CCS-203ENST00000526058 IGHDP01880 384 aa20.46■□□□□ 0.87
CCS-203ENST00000526058 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
CCS-203ENST00000526058 SLC44A5Q8NCS7 719 aa20.46■□□□□ 0.87
CCS-203ENST00000526058 SMCR8Q8TEV9 937 aaPredicted RBP20.46■□□□□ 0.87
CCS-203ENST00000526058 STRBPQ96SI9 672 aaKnown RBP20.46■□□□□ 0.87
CCS-203ENST00000526058 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
CCS-203ENST00000526058 USP17L12C9JPN9 530 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 USP17L21D6R901 530 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 PSMC4P43686 418 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 RGS19P49795 217 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 RAB3GAP1Q15042 981 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 SMC5Q8IY18 1101 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 APPBP2Q92624 585 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 TRIM47Q96LD4 638 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 PTCH2Q9Y6C5 1203 aa20.45■□□□□ 0.86
CCS-203ENST00000526058 C19orf81C9J6K1 198 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 M0R2C6 588 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 ZFYP08048 801 aaPredicted RBP20.44■□□□□ 0.86
CCS-203ENST00000526058 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 C12orf60Q5U649 245 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 FSD1Q9BTV5 496 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 ASCC2Q9H1I8 757 aaPredicted RBP20.44■□□□□ 0.86
CCS-203ENST00000526058 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 EMILIN3Q9NT22 766 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 TMOD4Q9NZQ9 345 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 PNMA3Q9UL41 463 aa20.44■□□□□ 0.86
CCS-203ENST00000526058 PDE1AP54750 535 aa20.43■□□□□ 0.86
CCS-203ENST00000526058 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
CCS-203ENST00000526058 CTR9Q6PD62 1173 aa20.43■□□□□ 0.86
CCS-203ENST00000526058 SEC62Q99442 399 aaKnown RBP20.43■□□□□ 0.86
CCS-203ENST00000526058 LNPKQ9C0E8 428 aa20.43■□□□□ 0.86
CCS-203ENST00000526058 STAP2Q9UGK3 403 aa20.43■□□□□ 0.86
CCS-203ENST00000526058 BRCA2P51587 3418 aa20.43■□□□□ 0.86
CCS-203ENST00000526058 TNRC18O15417 2968 aaPredicted RBP20.42■□□□□ 0.86
CCS-203ENST00000526058 GSG1L2A8MUP6 293 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 MPHOSPH10O00566 681 aaKnown RBP20.42■□□□□ 0.86
CCS-203ENST00000526058 GPAA1O43292 621 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 FMNL1O95466 1100 aaPredicted RBP20.42■□□□□ 0.86
CCS-203ENST00000526058 GNRH1P01148 92 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 OSBPP22059 807 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 PABPC4Q13310 644 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCS-203ENST00000526058 SEPT2Q15019 361 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 ZYXQ15942 572 aaKnown RBP20.42■□□□□ 0.86
CCS-203ENST00000526058 ANKRD13CQ8N6S4 541 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 ACER1Q8TDN7 264 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 DDRGK1Q96HY6 314 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 SWAP70Q9UH65 585 aa20.42■□□□□ 0.86
CCS-203ENST00000526058 DOCK3Q8IZD9 2030 aa20.41■□□□□ 0.86
CCS-203ENST00000526058 CDK8P49336 464 aa20.41■□□□□ 0.86
CCS-203ENST00000526058 USP17L2Q6R6M4 530 aa20.41■□□□□ 0.86
CCS-203ENST00000526058 AMOTL1Q8IY63 956 aa20.41■□□□□ 0.86
CCS-203ENST00000526058 FEZ1Q99689 392 aa20.41■□□□□ 0.86
CCS-203ENST00000526058 HOXA7P31268 230 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms